Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 RNU7-95P-201ENST00000459222 64 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.25□□□□□ -2.21
ERCC1P07992 AC079382.1-201ENST00000493346 557 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.25□□□□□ -2.21
ERCC1P07992 AC079140.3-201ENST00000511111 550 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 MTCO3P28-201ENST00000513351 515 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 RNU6-1129P-201ENST00000515964 104 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 RNU5F-4P-201ENST00000516581 114 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 RNU6-567P-201ENST00000516746 107 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.25□□□□□ -2.21
ERCC1P07992 AC106038.2-201ENST00000520706 568 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.25□□□□□ -2.21
ERCC1P07992 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 AC005668.1-201ENST00000571142 476 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 AL603839.4-201ENST00000624658 1005 ntBASIC1.25□□□□□ -2.21
ERCC1P07992 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ERCC1P07992 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.25□□□□□ -2.21
ERCC1P07992 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
ERCC1P07992 SNORD33-201ENST00000362761 85 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 RNU6-552P-201ENST00000362869 119 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC004965.1-201ENST00000413033 213 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 MTCO1P21-201ENST00000416634 589 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.24□□□□□ -2.21
ERCC1P07992 AC245047.4-201ENST00000433189 144 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC002486.1-201ENST00000435098 391 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC099677.2-201ENST00000436385 175 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AL031274.1-201ENST00000450334 232 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC007395.1-201ENST00000451333 677 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC007547.1-201ENST00000462177 490 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC079140.2-201ENST00000506193 142 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.24□□□□□ -2.21
ERCC1P07992 RNA5SP481-201ENST00000516814 122 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 RNA5SP437-201ENST00000517249 129 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.24□□□□□ -2.21
ERCC1P07992 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.24□□□□□ -2.21
ERCC1P07992 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.24□□□□□ -2.21
ERCC1P07992 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.24□□□□□ -2.21
ERCC1P07992 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.24□□□□□ -2.21
ERCC1P07992 AL645939.4-201ENST00000604495 135 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 AL359821.1-201ENST00000605519 182 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 MIR98-201ENST00000606724 119 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.24□□□□□ -2.21
ERCC1P07992 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ERCC1P07992 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
ERCC1P07992 RNU6-1019P-201ENST00000364424 107 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 Y_RNA.560-201ENST00000384689 102 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC1P07992 RPS27P16-201ENST00000425758 201 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC1P07992 AL135790.2-201ENST00000437701 267 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC027119.1-201ENST00000440877 241 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 MTND1P18-201ENST00000448191 573 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC1P07992 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.23□□□□□ -2.21
ERCC1P07992 RPS29P15-201ENST00000458329 171 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
ERCC1P07992 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC1P07992 AC098862.1-201ENST00000504991 413 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.23□□□□□ -2.21
ERCC1P07992 AK3P2-201ENST00000507976 429 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC108078.1-201ENST00000508073 725 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 TRMT112P2-201ENST00000512910 132 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.23□□□□□ -2.21
ERCC1P07992 RNU2-69P-201ENST00000516061 100 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 CYP4A27P-201ENST00000567218 190 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC109446.2-201ENST00000567872 497 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC012414.6-201ENST00000568241 401 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC234772.3-201ENST00000602277 528 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 Z98751.3-201ENST00000604447 521 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC027449.1-201ENST00000608890 407 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC006566.1-201ENST00000608943 513 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AP001506.1-201ENST00000615444 211 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 AC136475.10-201ENST00000620253 385 ntBASIC1.23□□□□□ -2.21
ERCC1P07992 RNU6-862P-201ENST00000362804 105 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RNU1-76P-201ENST00000362903 159 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RNU6-827P-201ENST00000365553 106 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RNU4-48P-201ENST00000365559 182 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RNU6-378P-201ENST00000384324 107 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RNU6-1026P-201ENST00000384465 108 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 MIR1-2-201ENST00000384961 85 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 SNORD70.1-201ENST00000391007 85 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 AL031577.2-201ENST00000404133 280 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 HMGN1P14-201ENST00000412459 517 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 ARL5AP1-201ENST00000418991 388 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.22□□□□□ -2.21
ERCC1P07992 RPL31P35-201ENST00000431058 377 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 AL033528.1-201ENST00000453780 140 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 snoU13.30-201ENST00000458951 104 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 SNORA25.17-201ENST00000517184 124 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.22□□□□□ -2.21
ERCC1P07992 AC103996.1-201ENST00000555468 102 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 AC021231.3-201ENST00000558497 370 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 MIR4703-201ENST00000577728 79 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 RSL24D1P11-201ENST00000591045 491 ntBASIC1.22□□□□□ -2.21
ERCC1P07992 AC011458.1-201ENST00000604034 617 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms