Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC068792.1-201ENST00000621354 417 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 AC139792.3-201ENST00000623525 224 ntBASIC1.39□□□□□ -2.19
HLA-DPB1P04440 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.39□□□□□ -2.19
HLA-DPB1P04440 MIR340-201ENST00000362125 95 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNU1-42P-201ENST00000364033 160 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNA5SP493-201ENST00000364115 91 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNA5SP190-201ENST00000365222 118 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNU4-20P-201ENST00000365601 151 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNU6-378P-201ENST00000384324 107 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.504-201ENST00000384481 104 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC078809.1-201ENST00000427601 140 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RPL23AP6-201ENST00000446637 472 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 MTCO3P38-201ENST00000468910 766 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC096745.1-201ENST00000509945 370 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 SNORA14.1-201ENST00000516113 141 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNVU1-2-201ENST00000516326 135 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 RNA5SP490-201ENST00000517141 136 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AP005597.4-201ENST00000526762 229 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC109446.1-201ENST00000566172 220 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC022254.1-201ENST00000567857 235 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 MIR3169-201ENST00000578032 83 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AL022345.1-201ENST00000607292 135 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC005296.1-201ENST00000616145 209 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 MIR7843-201ENST00000622274 79 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AC022513.1-201ENST00000624512 117 ntBASIC1.38□□□□□ -2.19
HLA-DPB1P04440 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DPB1P04440 AP006437.1-201ENST00000641440 3685 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 RNU6-23P-201ENST00000363283 107 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.332-201ENST00000365271 113 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.378-201ENST00000365652 113 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 RNU6-26P-201ENST00000383985 107 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 RNU6-38P-201ENST00000384085 107 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 USP9YP14-201ENST00000430663 563 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 RNU6-333P-201ENST00000459117 107 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC079140.5-201ENST00000507882 310 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.675-201ENST00000516389 149 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC104383.1-201ENST00000530297 370 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 CBX3P4-201ENST00000538909 354 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DPB1P04440 Z98751.3-201ENST00000604447 521 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AP001330.5-201ENST00000607176 411 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC064836.2-201ENST00000609491 462 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 AC017083.3-201ENST00000609955 700 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 PCGEM1.1-201ENST00000613431 131 ntBASIC1.37□□□□□ -2.19
HLA-DPB1P04440 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 Y_RNA.51-201ENST00000362725 102 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 SNORA12.2-201ENST00000391040 156 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 RNU2-66P-201ENST00000410650 161 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AP000275.1-201ENST00000411943 390 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 UBE2V1P4-201ENST00000425374 344 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 HSPE1P21-201ENST00000438283 308 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 HMGN2P23-201ENST00000456759 269 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 TPTE2P5-203ENST00000458118 728 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 RNA5SP57-201ENST00000459463 123 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 RNU7-138P-201ENST00000459479 64 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AC016632.1-201ENST00000503994 196 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 RNA5SP401-201ENST00000515920 127 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 RNU6-189P-201ENST00000516120 101 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 CENPUP1-201ENST00000526649 1202 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 MIR3683-201ENST00000580847 82 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 MIR3941-201ENST00000582572 103 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 BNIP3P25-201ENST00000596023 559 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 AC092747.3-201ENST00000603769 301 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 MIR6715A-201ENST00000615929 79 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HLA-DPB1P04440 MTND5P26-201ENST00000426018 1752 ntBASIC1.36□□□□□ -2.19
HLA-DPB1P04440 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AC092268.1-201ENST00000342691 405 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 SNORD37.1-201ENST00000390968 65 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AL357139.1-201ENST00000407792 426 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 MIR1304-201ENST00000408243 91 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 EIF4EP2-201ENST00000422816 654 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 MTCO2P3-201ENST00000442543 421 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 SNRPEP8-201ENST00000442866 260 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 AL035666.1-201ENST00000446195 348 ntBASIC1.35□□□□□ -2.19
HLA-DPB1P04440 FTH1P25-201ENST00000447665 469 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms