Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-165P-201ENST00000517170 99 ntBASIC-0.42□□□□□ -2.48
APOBP04114 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.42□□□□□ -2.48
APOBP04114 ATM-228ENST00000639240 498 ntTSL 5 BASIC-0.42□□□□□ -2.48
APOBP04114 SNORD114-11-201ENST00000363738 75 ntBASIC-0.43□□□□□ -2.48
APOBP04114 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MIR145-201ENST00000384967 88 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MTND5P2-201ENST00000442927 1142 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC016925.1-201ENST00000458303 298 ntBASIC-0.43□□□□□ -2.48
APOBP04114 ZNF519P3-201ENST00000557158 1032 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC009032.1-201ENST00000617574 431 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AL953862.1-201ENST00000423016 168 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC-0.43□□□□□ -2.48
APOBP04114 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.43□□□□□ -2.48
APOBP04114 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.43□□□□□ -2.48
APOBP04114 LINC01399-202ENST00000458450 244 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC107297.1-201ENST00000459991 176 ntBASIC-0.43□□□□□ -2.48
APOBP04114 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MTCO3P43-201ENST00000440974 771 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.43□□□□□ -2.48
APOBP04114 AC024589.1-201ENST00000512207 263 ntBASIC-0.43□□□□□ -2.48
APOBP04114 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.43□□□□□ -2.48
APOBP04114 SUB1P2-201ENST00000556401 297 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AL163051.2-201ENST00000618976 735 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.43□□□□□ -2.48
APOBP04114 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.43□□□□□ -2.48
APOBP04114 SNORD115-24-201ENST00000363528 82 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.43□□□□□ -2.48
APOBP04114 MIR892B-201ENST00000401279 77 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MIR1262-201ENST00000408276 93 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AL392003.1-201ENST00000434394 243 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.43□□□□□ -2.48
APOBP04114 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.43□□□□□ -2.48
APOBP04114 AC114755.3-201ENST00000481111 251 ntBASIC-0.43□□□□□ -2.48
APOBP04114 RNA5SP461-201ENST00000516451 104 ntBASIC-0.43□□□□□ -2.48
APOBP04114 SNORA31.10-201ENST00000516482 106 ntBASIC-0.43□□□□□ -2.48
APOBP04114 AC022616.3-201ENST00000523940 148 ntBASIC-0.43□□□□□ -2.48
APOBP04114 MTCO2P15-201ENST00000532655 656 ntBASIC-0.43□□□□□ -2.48
APOBP04114 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.43□□□□□ -2.48
APOBP04114 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.44□□□□□ -2.48
APOBP04114 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.44□□□□□ -2.48
APOBP04114 MIR29B2-201ENST00000385055 81 ntBASIC-0.44□□□□□ -2.48
APOBP04114 MIR514A1-201ENST00000385133 98 ntBASIC-0.44□□□□□ -2.48
APOBP04114 SNORA40.8-201ENST00000411034 126 ntBASIC-0.44□□□□□ -2.48
APOBP04114 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.44□□□□□ -2.48
APOBP04114 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.44□□□□□ -2.48
APOBP04114 AC074344.1-201ENST00000512823 224 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AC022483.1-201ENST00000514020 567 ntBASIC-0.44□□□□□ -2.48
APOBP04114 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.44□□□□□ -2.48
APOBP04114 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
APOBP04114 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.44□□□□□ -2.48
APOBP04114 AL031176.1-201ENST00000604554 466 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AL162726.3-218ENST00000636401 95 ntBASIC-0.44□□□□□ -2.48
APOBP04114 SNORD114-14-201ENST00000362723 75 ntBASIC-0.44□□□□□ -2.48
APOBP04114 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.44□□□□□ -2.48
APOBP04114 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.44□□□□□ -2.48
APOBP04114 ELOCP9-201ENST00000418624 239 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-0.44□□□□□ -2.48
APOBP04114 AC003071.1-201ENST00000451219 789 ntBASIC-0.44□□□□□ -2.48
APOBP04114 RNU7-165P-201ENST00000458864 60 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AP002371.1-201ENST00000463604 433 ntBASIC-0.44□□□□□ -2.48
APOBP04114 MIR4432-201ENST00000581823 84 ntBASIC-0.44□□□□□ -2.48
APOBP04114 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.44□□□□□ -2.48
APOBP04114 RNU6-480P-201ENST00000384332 107 ntBASIC-0.44□□□□□ -2.48
APOBP04114 RNU6-296P-201ENST00000384608 107 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.44□□□□□ -2.48
APOBP04114 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.44□□□□□ -2.48
APOBP04114 ELOCP14-201ENST00000428070 331 ntBASIC-0.44□□□□□ -2.48
APOBP04114 ELOCP7-201ENST00000439968 331 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.44□□□□□ -2.48
APOBP04114 SNORA70.12-201ENST00000516084 153 ntBASIC-0.44□□□□□ -2.48
APOBP04114 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.44□□□□□ -2.48
APOBP04114 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.44□□□□□ -2.48
APOBP04114 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-0.44□□□□□ -2.48
APOBP04114 AL159972.1-201ENST00000625150 448 ntBASIC-0.44□□□□□ -2.48
APOBP04114 RNU4-16P-201ENST00000364737 141 ntBASIC-0.45□□□□□ -2.48
APOBP04114 SNORA75.2-201ENST00000391138 150 ntBASIC-0.45□□□□□ -2.48
APOBP04114 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
APOBP04114 RNU6-848P-201ENST00000515948 107 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNU6-617P-201ENST00000516147 107 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNU6-473P-201ENST00000516164 107 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.45□□□□□ -2.48
APOBP04114 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.45□□□□□ -2.48
APOBP04114 AC009318.4-201ENST00000620496 486 ntBASIC-0.45□□□□□ -2.48
APOBP04114 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNA5SP517-201ENST00000364724 117 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RAP1BP3-201ENST00000407180 549 ntBASIC-0.45□□□□□ -2.48
APOBP04114 AC005042.3-201ENST00000453230 174 ntBASIC-0.45□□□□□ -2.48
APOBP04114 AC013476.2-201ENST00000614456 459 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RPS15AP10-201ENST00000432472 382 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RBBP4P6-201ENST00000508098 202 ntBASIC-0.45□□□□□ -2.48
APOBP04114 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.45□□□□□ -2.48
APOBP04114 SNORD3E-202ENST00000627253 216 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RNU2-33P-201ENST00000410344 192 ntBASIC-0.45□□□□□ -2.48
APOBP04114 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.45□□□□□ -2.48
APOBP04114 MRPL42P4-201ENST00000453267 443 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RPL39P39-201ENST00000455840 151 ntBASIC-0.45□□□□□ -2.48
APOBP04114 RPL23AP91-201ENST00000569211 455 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms