Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNA5SP450-201ENST00000411206 102 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AC096920.1-201ENST00000423991 241 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.77□□□□□ -2.13
MMP1P03956 MTND3P21-201ENST00000433774 331 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AL137159.1-201ENST00000452808 512 ntBASIC1.77□□□□□ -2.13
MMP1P03956 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.77□□□□□ -2.13
MMP1P03956 MTCYBP40-201ENST00000509390 1135 ntBASIC1.77□□□□□ -2.13
MMP1P03956 RNA5SP401-201ENST00000515920 127 ntBASIC1.77□□□□□ -2.13
MMP1P03956 RNU2-44P-201ENST00000516795 194 ntBASIC1.77□□□□□ -2.13
MMP1P03956 RNU6-667P-201ENST00000517186 102 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AP000763.2-201ENST00000540641 163 ntBASIC1.77□□□□□ -2.13
MMP1P03956 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.77□□□□□ -2.13
MMP1P03956 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.77□□□□□ -2.13
MMP1P03956 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.77□□□□□ -2.13
MMP1P03956 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.77□□□□□ -2.13
MMP1P03956 SNORD53B-201ENST00000577887 78 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.77□□□□□ -2.13
MMP1P03956 AL109918.3-201ENST00000603072 338 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AC026585.1-201ENST00000619582 524 ntBASIC1.77□□□□□ -2.13
MMP1P03956 AC008555.8-201ENST00000623602 2168 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
MMP1P03956 ZNF702P-202ENST00000434269 1966 ntBASIC1.76□□□□□ -2.13
MMP1P03956 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
MMP1P03956 Y_RNA.122-201ENST00000363331 96 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RNU6-1090P-201ENST00000364065 94 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RNU6-266P-201ENST00000364225 107 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MIR489-201ENST00000384923 84 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MIR514A2-201ENST00000385131 88 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MIR514A3-201ENST00000385132 88 ntBASIC1.76□□□□□ -2.13
MMP1P03956 AL606923.1-201ENST00000406616 190 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RNU2-48P-201ENST00000410694 191 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RNU6-1068P-201ENST00000410958 103 ntBASIC1.76□□□□□ -2.13
MMP1P03956 OR9R1P-201ENST00000412200 877 ntBASIC1.76□□□□□ -2.13
MMP1P03956 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.76□□□□□ -2.13
MMP1P03956 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.76□□□□□ -2.13
MMP1P03956 AC009474.2-201ENST00000451383 136 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RPL23AP3-201ENST00000453844 468 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RNU7-167P-201ENST00000459160 62 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MTCO3P38-201ENST00000468910 766 ntBASIC1.76□□□□□ -2.13
MMP1P03956 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.76□□□□□ -2.13
MMP1P03956 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.76□□□□□ -2.13
MMP1P03956 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
MMP1P03956 RNU6-1038P-201ENST00000516516 104 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RNU6-314P-201ENST00000516574 104 ntBASIC1.76□□□□□ -2.13
MMP1P03956 RN7SKP256-201ENST00000517201 314 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MTND4P7-201ENST00000523876 130 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MIR4287-201ENST00000579398 78 ntBASIC1.76□□□□□ -2.13
MMP1P03956 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.76□□□□□ -2.13
MMP1P03956 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.76□□□□□ -2.13
MMP1P03956 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.76□□□□□ -2.13
MMP1P03956 AC090517.3-201ENST00000625170 141 ntBASIC1.76□□□□□ -2.13
MMP1P03956 MTND4P14-201ENST00000435799 1354 ntBASIC1.75□□□□□ -2.13
MMP1P03956 Y_RNA.38-201ENST00000362617 102 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-37P-201ENST00000362692 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-11P-201ENST00000364234 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 Y_RNA.378-201ENST00000365652 113 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-25P-201ENST00000383873 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-1-201ENST00000383898 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-48P-201ENST00000384161 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-36P-201ENST00000384172 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-4P-201ENST00000384205 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-5P-201ENST00000384238 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-3P-201ENST00000384314 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-16P-201ENST00000384385 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-1215P-201ENST00000384441 102 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-15P-201ENST00000384534 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-2-201ENST00000384627 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-29P-201ENST00000384637 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-9-201ENST00000384776 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-33P-201ENST00000384793 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 MIR320A-201ENST00000385302 82 ntBASIC1.75□□□□□ -2.13
MMP1P03956 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
MMP1P03956 MIR1276-201ENST00000408707 83 ntBASIC1.75□□□□□ -2.13
MMP1P03956 SNORD56-201ENST00000413522 71 ntBASIC1.75□□□□□ -2.13
MMP1P03956 MTCO1P21-201ENST00000416634 589 ntBASIC1.75□□□□□ -2.13
MMP1P03956 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.75□□□□□ -2.13
MMP1P03956 USP9YP18-201ENST00000425912 695 ntBASIC1.75□□□□□ -2.13
MMP1P03956 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-1281P-201ENST00000516223 105 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNA5SP490-201ENST00000517141 136 ntBASIC1.75□□□□□ -2.13
MMP1P03956 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.75□□□□□ -2.13
MMP1P03956 CYCSP27-201ENST00000527643 293 ntBASIC1.75□□□□□ -2.13
MMP1P03956 AC023050.3-201ENST00000541142 333 ntBASIC1.75□□□□□ -2.13
MMP1P03956 RNU6-6P-201ENST00000606623 107 ntBASIC1.75□□□□□ -2.13
MMP1P03956 AL627230.6-201ENST00000611129 280 ntBASIC1.75□□□□□ -2.13
MMP1P03956 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.75□□□□□ -2.13
MMP1P03956 AC007792.1-201ENST00000623023 402 ntBASIC1.75□□□□□ -2.13
MMP1P03956 MIR1321-201ENST00000637766 79 ntBASIC1.75□□□□□ -2.13
MMP1P03956 U4.7-201ENST00000638126 106 ntBASIC1.75□□□□□ -2.13
MMP1P03956 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.75□□□□□ -2.13
MMP1P03956 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
MMP1P03956 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.74□□□□□ -2.13
MMP1P03956 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.74□□□□□ -2.13
MMP1P03956 RNU6-212P-201ENST00000362642 104 ntBASIC1.74□□□□□ -2.13
MMP1P03956 SNORD56.1-201ENST00000362913 68 ntBASIC1.74□□□□□ -2.13
MMP1P03956 Y_RNA.224-201ENST00000364308 111 ntBASIC1.74□□□□□ -2.13
MMP1P03956 RNU6-522P-201ENST00000364497 107 ntBASIC1.74□□□□□ -2.13
MMP1P03956 RNU6-60P-201ENST00000364792 103 ntBASIC1.74□□□□□ -2.13
MMP1P03956 Y_RNA.480-201ENST00000384364 102 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms