Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 RPS6P15-201ENST00000431996 751 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AL356010.1-201ENST00000456364 102 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AC005908.1-201ENST00000468701 347 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.21□□□□□ -2.22
MT-ND4P03905 MTCO2P4-201ENST00000517968 247 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.21□□□□□ -2.22
MT-ND4P03905 AC027807.1-201ENST00000559921 996 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.21□□□□□ -2.22
MT-ND4P03905 AL391840.1-201ENST00000571144 367 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AC068790.2-201ENST00000602601 557 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 Z98751.3-201ENST00000604447 521 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 AP001836.1-201ENST00000604675 523 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 RNU6-85P-201ENST00000605989 107 ntBASIC1.21□□□□□ -2.22
MT-ND4P03905 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MT-ND4P03905 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.2□□□□□ -2.22
MT-ND4P03905 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
MT-ND4P03905 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MT-ND4P03905 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MT-ND4P03905 RNU6-661P-201ENST00000362409 107 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 U3.9-201ENST00000363823 204 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.2□□□□□ -2.22
MT-ND4P03905 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
MT-ND4P03905 SNORD26-201ENST00000384147 75 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.2□□□□□ -2.22
MT-ND4P03905 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
MT-ND4P03905 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.2□□□□□ -2.22
MT-ND4P03905 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.2□□□□□ -2.22
MT-ND4P03905 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.2□□□□□ -2.22
MT-ND4P03905 USP9YP29-201ENST00000445112 563 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 TOMM22P6-201ENST00000465035 409 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 RN7SL429P-201ENST00000479090 223 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 RN7SL489P-201ENST00000486185 223 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 RN7SL327P-201ENST00000488659 223 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC016632.1-201ENST00000503994 196 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC079140.5-201ENST00000507882 310 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC097473.1-201ENST00000508142 408 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 RNU6-1098P-201ENST00000516772 96 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC069113.1-201ENST00000517763 267 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AP005597.4-201ENST00000526762 229 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 HIF1AP1-201ENST00000553642 175 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.2□□□□□ -2.22
MT-ND4P03905 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.2□□□□□ -2.22
MT-ND4P03905 MIR4528-201ENST00000577763 90 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 MIR5094-201ENST00000578766 85 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AL158827.2-201ENST00000602494 330 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC109347.2-201ENST00000610220 349 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 RN7SL853P-201ENST00000617250 223 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 SNORA43.4-201ENST00000629559 138 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AL691447.3-201ENST00000635020 330 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 AC245060.5-201ENST00000610778 3293 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.2□□□□□ -2.22
MT-ND4P03905 MTND4P14-201ENST00000435799 1354 ntBASIC1.2□□□□□ -2.22
MT-ND4P03905 MTND5P9-201ENST00000503854 1755 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
MT-ND4P03905 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
MT-ND4P03905 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 Y_RNA.67-201ENST00000362870 100 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 RNU6-112P-201ENST00000363599 104 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 SNORA32.2-201ENST00000384049 122 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 RNU6-517P-201ENST00000384362 110 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC092447.3-201ENST00000426027 686 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC010095.1-201ENST00000443543 144 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.19□□□□□ -2.22
MT-ND4P03905 RNU7-180P-201ENST00000459240 63 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 SNORD13-201ENST00000459299 104 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC007547.1-201ENST00000462177 490 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.19□□□□□ -2.22
MT-ND4P03905 YWHAEP4-201ENST00000505390 198 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.19□□□□□ -2.22
MT-ND4P03905 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.19□□□□□ -2.22
MT-ND4P03905 AP000889.1-201ENST00000530968 660 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 EIF4A1P12-201ENST00000551910 141 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC015720.1-201ENST00000565251 277 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 CYP4A27P-201ENST00000567218 190 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.19□□□□□ -2.22
MT-ND4P03905 AC063944.3-201ENST00000609969 533 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 U2.17-201ENST00000611454 95 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC073114.1-201ENST00000612027 490 ntBASIC1.19□□□□□ -2.22
MT-ND4P03905 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.18□□□□□ -2.22
MT-ND4P03905 RNU4-13P-201ENST00000364019 141 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 RNU6-438P-201ENST00000365561 103 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 RNU6-296P-201ENST00000384608 107 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 SNORD73A-201ENST00000386062 65 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MT-ND4P03905 SNORA67.5-201ENST00000391036 107 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 AL049545.1-201ENST00000401856 572 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.18□□□□□ -2.22
MT-ND4P03905 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.18□□□□□ -2.22
MT-ND4P03905 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.18□□□□□ -2.22
MT-ND4P03905 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
MT-ND4P03905 RNU7-63P-201ENST00000459054 62 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 RNU7-14P-201ENST00000459331 62 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 AC008628.2-201ENST00000502605 298 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 ARL2BPP4-201ENST00000506854 471 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 CCDC34P1-201ENST00000507441 517 ntBASIC1.18□□□□□ -2.22
MT-ND4P03905 RPL39P5-202ENST00000512505 151 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms