Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC011979.2-201ENST00000527568 352 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC015688.6-201ENST00000577737 104 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AL606834.3-201ENST00000602615 496 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 BNIP3P31-201ENST00000604515 566 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC090578.1-201ENST00000604955 591 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC144521.1-201ENST00000607148 956 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 RNU6-87P-201ENST00000607561 108 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC091965.4-201ENST00000607691 587 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC006386.1-201ENST00000619436 415 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.52□□□□□ -2.33
COL1A1P02452 AC068787.1-201ENST00000623908 691 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.52□□□□□ -2.33
COL1A1P02452 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.52□□□□□ -2.33
COL1A1P02452 AC010615.1-201ENST00000594254 1764 ntBASIC0.52□□□□□ -2.33
COL1A1P02452 RNU6-527P-201ENST00000363425 104 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 RNU6-511P-201ENST00000363496 107 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 SNORA2A-201ENST00000383885 135 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 RNU6-1257P-201ENST00000384625 110 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 RNU6-1179P-201ENST00000384667 107 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 MIR608-201ENST00000384820 100 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 MIR544A-201ENST00000384855 91 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
COL1A1P02452 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.51□□□□□ -2.33
COL1A1P02452 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.51□□□□□ -2.33
COL1A1P02452 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.51□□□□□ -2.33
COL1A1P02452 snoU13.19-201ENST00000459148 104 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 MTND3P5-201ENST00000512798 333 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AC112206.3-201ENST00000514578 389 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 RNU5A-4P-201ENST00000516588 111 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 RNA5SP481-201ENST00000516814 122 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 ADI1P3-201ENST00000549509 470 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.51□□□□□ -2.33
COL1A1P02452 AL391001.1-201ENST00000602747 715 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AL592221.1-201ENST00000605266 382 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 BCRP9-201ENST00000605312 388 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AC018889.1-201ENST00000605372 397 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AL121895.2-201ENST00000619558 447 ntBASIC0.51□□□□□ -2.33
COL1A1P02452 AC099786.3-201ENST00000565735 1410 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 AC073343.1-201ENST00000328239 651 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 RNU1-96P-201ENST00000364163 162 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 RAP1BP3-201ENST00000407180 549 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 MTCO3P41-201ENST00000414801 328 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 AL669831.1-202ENST00000428504 417 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.5□□□□□ -2.33
COL1A1P02452 AC022447.4-201ENST00000504053 364 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.5□□□□□ -2.33
COL1A1P02452 RNU6-276P-201ENST00000516114 96 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 SNORA70.22-201ENST00000517160 124 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.5□□□□□ -2.33
COL1A1P02452 SUMO2P18-201ENST00000518873 252 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.5□□□□□ -2.33
COL1A1P02452 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.5□□□□□ -2.33
COL1A1P02452 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 MTCO2P2-201ENST00000591258 225 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 AC121334.2-201ENST00000605387 271 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 FAM157A-202ENST00000615155 405 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 RMST_7.1-201ENST00000621935 268 ntBASIC0.5□□□□□ -2.33
COL1A1P02452 RNU6-1019P-201ENST00000364424 107 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 MIR329-1-201ENST00000385028 80 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.49□□□□□ -2.33
COL1A1P02452 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.49□□□□□ -2.33
COL1A1P02452 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.49□□□□□ -2.33
COL1A1P02452 MTND4P20-201ENST00000424125 869 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC007969.2-201ENST00000441891 191 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.49□□□□□ -2.33
COL1A1P02452 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.49□□□□□ -2.33
COL1A1P02452 AC010587.2-201ENST00000511727 448 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 RNU4-57P-201ENST00000515980 135 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 SNORA19.3-201ENST00000516165 130 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 RNU6-201P-201ENST00000517100 61 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.49□□□□□ -2.33
COL1A1P02452 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.49□□□□□ -2.33
COL1A1P02452 AC013828.2-201ENST00000532487 235 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC109446.1-201ENST00000566172 220 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.49□□□□□ -2.33
COL1A1P02452 MIR3664-201ENST00000579074 99 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 MIR548AC-201ENST00000585049 88 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC091135.1-201ENST00000585943 307 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
COL1A1P02452 PART1_2.1-201ENST00000612397 250 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 AC026585.1-201ENST00000619582 524 ntBASIC0.49□□□□□ -2.33
COL1A1P02452 SNORA4.1-201ENST00000364263 144 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-371P-201ENST00000364283 108 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 SNORD32B-201ENST00000364460 84 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 SNORD116.1-201ENST00000365628 92 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-142P-201ENST00000384019 107 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-190P-201ENST00000384154 102 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 MIR19B1-201ENST00000384829 87 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 RNA5SP299-201ENST00000391203 116 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AL022718.1-201ENST00000412004 84 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.48□□□□□ -2.33
COL1A1P02452 MTND5P2-201ENST00000442927 1142 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.48□□□□□ -2.33
COL1A1P02452 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.48□□□□□ -2.33
COL1A1P02452 RNU6-1003P-201ENST00000517099 105 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC091163.3-201ENST00000518269 1144 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.48□□□□□ -2.33
COL1A1P02452 MIR5697-201ENST00000578045 78 ntBASIC0.48□□□□□ -2.33
COL1A1P02452 MIR6718-201ENST00000616153 80 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms