Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL441985.1-201ENST00000457727 251 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 RPL30P10-201ENST00000488148 337 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.74□□□□□ -1.81
RAPGEF3O95398 MIR5701-3-201ENST00000578890 82 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 MIR5701-1-201ENST00000585138 82 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 RNU6-91P-201ENST00000607774 107 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 MIR5701-2-201ENST00000615634 82 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 MIR7153-201ENST00000637758 57 ntBASIC3.74□□□□□ -1.81
RAPGEF3O95398 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RAPGEF3O95398 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RAPGEF3O95398 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAPGEF3O95398 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RAPGEF3O95398 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.74□□□□□ -1.81
RAPGEF3O95398 AC008669.1-201ENST00000565823 2178 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AC009541.1-201ENST00000438279 2662 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AL356292.1-201ENST00000283110 373 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 Y_RNA.145-201ENST00000363527 102 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 SNORA63C-201ENST00000364578 129 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 RNY1P14-201ENST00000384426 108 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 MTCYBP2-201ENST00000407745 171 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.73□□□□□ -1.81
RAPGEF3O95398 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.73□□□□□ -1.81
RAPGEF3O95398 AC107626.1-201ENST00000471084 183 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 RNU6-120P-201ENST00000516077 103 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 RNU5B-3P-201ENST00000516601 115 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 RNU7-4P-201ENST00000516961 62 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 GNAI2P1-201ENST00000541815 315 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AC016256.1-201ENST00000547971 354 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.73□□□□□ -1.81
RAPGEF3O95398 AL133393.1-201ENST00000603277 287 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 7SK.7-201ENST00000603504 247 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.73□□□□□ -1.81
RAPGEF3O95398 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 AC006157.1-201ENST00000611750 366 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.73□□□□□ -1.81
RAPGEF3O95398 AC010889.1-201ENST00000566193 2666 ntBASIC3.73□□□□□ -1.81
RAPGEF3O95398 Y_RNA.80-201ENST00000362996 102 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 Y_RNA.158-201ENST00000363651 101 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 Y_RNA.496-201ENST00000384444 101 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 RNU6-700P-201ENST00000391043 107 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 MIR1287-201ENST00000408492 90 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 RNU2-49P-201ENST00000410666 184 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.72□□□□□ -1.81
RAPGEF3O95398 AL451074.5-201ENST00000415894 435 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 MTCYBP10-201ENST00000424905 650 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 RPL23AP95-201ENST00000426806 265 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 RN7SKP210-201ENST00000459176 261 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 RPS26P21-201ENST00000475397 348 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 AP001025.1-201ENST00000486139 332 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.72□□□□□ -1.81
RAPGEF3O95398 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.72□□□□□ -1.81
RAPGEF3O95398 SCARNA17.1-201ENST00000516211 143 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 SCARNA17.2-201ENST00000516334 143 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RAPGEF3O95398 AC021269.2-201ENST00000532318 330 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.72□□□□□ -1.81
RAPGEF3O95398 SCARNA17.4-201ENST00000614296 143 ntBASIC3.72□□□□□ -1.81
RAPGEF3O95398 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RAPGEF3O95398 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RAPGEF3O95398 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RAPGEF3O95398 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RAPGEF3O95398 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.71□□□□□ -1.82
RAPGEF3O95398 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.71□□□□□ -1.82
RAPGEF3O95398 Y_RNA.140-201ENST00000363474 103 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 RNU6-99P-201ENST00000364721 107 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 Y_RNA.364-201ENST00000365532 101 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 CD24P4-201ENST00000382840 243 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 RNU6-1222P-201ENST00000384615 107 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 RNA5SP354-201ENST00000391247 136 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 MRPL42P3-201ENST00000401492 326 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 RNU6-1156P-201ENST00000410365 100 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.71□□□□□ -1.82
RAPGEF3O95398 AL031659.1-201ENST00000447075 539 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 RNU6-475P-201ENST00000516073 104 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 AL590705.4-201ENST00000532209 134 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.71□□□□□ -1.82
RAPGEF3O95398 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.71□□□□□ -1.82
RAPGEF3O95398 AC099778.2-201ENST00000610904 211 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 AC007485.1-201ENST00000616755 206 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 AL138825.1-201ENST00000618587 192 ntBASIC3.71□□□□□ -1.82
RAPGEF3O95398 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RAPGEF3O95398 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.7□□□□□ -1.82
RAPGEF3O95398 Y_RNA.39-201ENST00000362620 98 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 RNU6-1141P-201ENST00000364520 107 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 SNORD32A-201ENST00000364805 84 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 RNU6-142P-201ENST00000384019 107 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 RNU6-622P-201ENST00000384272 103 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 MIR625-201ENST00000385047 85 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 RNA5SP213-201ENST00000391031 106 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC007098.1-201ENST00000420122 367 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 GSTA11P-201ENST00000452866 669 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.7□□□□□ -1.82
RAPGEF3O95398 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC004584.2-201ENST00000570407 410 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC090897.2-201ENST00000581715 130 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC060766.3-201ENST00000591442 263 ntBASIC3.7□□□□□ -1.82
RAPGEF3O95398 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms