Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD4O95243 AC096745.1-201ENST00000509945 370 ntBASIC2.49□□□□□ -2.01
MBD4O95243 FAM206BP-201ENST00000510179 541 ntBASIC2.49□□□□□ -2.01
MBD4O95243 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD4O95243 AC007229.1-201ENST00000590455 412 ntBASIC2.49□□□□□ -2.01
MBD4O95243 CTHRC1P1-201ENST00000605383 469 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.15-201ENST00000611544 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 MIR6840-201ENST00000611937 71 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.16-201ENST00000613119 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD4O95243 Y_RNA.783-201ENST00000613546 102 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.12-201ENST00000613778 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.20-201ENST00000613956 192 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.9-201ENST00000615427 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.11-201ENST00000616345 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.2-201ENST00000616535 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.3-201ENST00000617785 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.19-201ENST00000618602 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 RNU2-1-201ENST00000618664 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.6-201ENST00000619225 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.5-201ENST00000619465 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 U2.10-201ENST00000620268 191 ntBASIC2.49□□□□□ -2.01
MBD4O95243 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.49□□□□□ -2.01
MBD4O95243 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
MBD4O95243 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
MBD4O95243 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
MBD4O95243 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.48□□□□□ -2.01
MBD4O95243 MIRLET7G-201ENST00000362280 84 ntBASIC2.48□□□□□ -2.01
MBD4O95243 Y_RNA.157-201ENST00000363638 102 ntBASIC2.48□□□□□ -2.01
MBD4O95243 SNORA12-201ENST00000391162 147 ntBASIC2.48□□□□□ -2.01
MBD4O95243 RNU6-325P-201ENST00000411132 105 ntBASIC2.48□□□□□ -2.01
MBD4O95243 VN1R36P-201ENST00000414936 291 ntBASIC2.48□□□□□ -2.01
MBD4O95243 AL645568.3-201ENST00000433683 316 ntBASIC2.48□□□□□ -2.01
MBD4O95243 UBE2V1P8-201ENST00000437166 265 ntBASIC2.48□□□□□ -2.01
MBD4O95243 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD4O95243 RNU7-66P-201ENST00000459469 62 ntBASIC2.48□□□□□ -2.01
MBD4O95243 AC055731.1-201ENST00000474387 401 ntBASIC2.48□□□□□ -2.01
MBD4O95243 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.48□□□□□ -2.01
MBD4O95243 PTP4A1P4-201ENST00000512479 322 ntBASIC2.48□□□□□ -2.01
MBD4O95243 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.48□□□□□ -2.01
MBD4O95243 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD4O95243 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.48□□□□□ -2.01
MBD4O95243 PCGEM1.1-201ENST00000613431 131 ntBASIC2.48□□□□□ -2.01
MBD4O95243 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
MBD4O95243 AC073869.6-201ENST00000640656 341 ntBASIC2.48□□□□□ -2.01
MBD4O95243 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
MBD4O95243 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MBD4O95243 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MBD4O95243 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.47□□□□□ -2.01
MBD4O95243 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MBD4O95243 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MBD4O95243 SNORD114-1-201ENST00000362705 72 ntBASIC2.47□□□□□ -2.01
MBD4O95243 RNU6-743P-201ENST00000364151 106 ntBASIC2.47□□□□□ -2.01
MBD4O95243 RNU6-26P-201ENST00000383985 107 ntBASIC2.47□□□□□ -2.01
MBD4O95243 Y_RNA.414-201ENST00000384011 101 ntBASIC2.47□□□□□ -2.01
MBD4O95243 SNORA6-201ENST00000384033 151 ntBASIC2.47□□□□□ -2.01
MBD4O95243 SNORD14D-201ENST00000384390 87 ntBASIC2.47□□□□□ -2.01
MBD4O95243 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
MBD4O95243 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MBD4O95243 SNORD115-47-201ENST00000391226 86 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AL357139.1-201ENST00000407792 426 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AC012306.1-201ENST00000423267 114 ntBASIC2.47□□□□□ -2.01
MBD4O95243 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD4O95243 IPO7P1-201ENST00000442031 636 ntBASIC2.47□□□□□ -2.01
MBD4O95243 snoU13.15-201ENST00000459407 104 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AC079804.2-201ENST00000490376 200 ntBASIC2.47□□□□□ -2.01
MBD4O95243 EIF4A1P12-201ENST00000551910 141 ntBASIC2.47□□□□□ -2.01
MBD4O95243 CPDP1-201ENST00000579660 283 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AC068790.6-201ENST00000602558 258 ntBASIC2.47□□□□□ -2.01
MBD4O95243 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
MBD4O95243 MIR8076-201ENST00000611401 83 ntBASIC2.47□□□□□ -2.01
MBD4O95243 AC005520.5-201ENST00000613926 164 ntBASIC2.47□□□□□ -2.01
MBD4O95243 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
MBD4O95243 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD4O95243 SNORA36A-201ENST00000384221 132 ntBASIC2.46□□□□□ -2.02
MBD4O95243 AL355497.1-201ENST00000406262 551 ntBASIC2.46□□□□□ -2.02
MBD4O95243 MIR1262-201ENST00000408276 93 ntBASIC2.46□□□□□ -2.02
MBD4O95243 WARS2P1-201ENST00000429678 537 ntBASIC2.46□□□□□ -2.02
MBD4O95243 AL445646.1-201ENST00000431784 216 ntBASIC2.46□□□□□ -2.02
MBD4O95243 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MBD4O95243 MTCO3P18-201ENST00000440206 761 ntBASIC2.46□□□□□ -2.02
MBD4O95243 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.46□□□□□ -2.02
MBD4O95243 AC021146.2-201ENST00000504736 556 ntBASIC2.46□□□□□ -2.02
MBD4O95243 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD4O95243 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
MBD4O95243 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD4O95243 AC109446.1-201ENST00000566172 220 ntBASIC2.46□□□□□ -2.02
MBD4O95243 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD4O95243 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.46□□□□□ -2.02
MBD4O95243 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.46□□□□□ -2.02
MBD4O95243 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD4O95243 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD4O95243 RNU6-1252P-201ENST00000363054 104 ntBASIC2.45□□□□□ -2.02
MBD4O95243 RNU6-234P-201ENST00000365229 104 ntBASIC2.45□□□□□ -2.02
MBD4O95243 SNORA51.11-201ENST00000384442 131 ntBASIC2.45□□□□□ -2.02
MBD4O95243 MIR548F1-201ENST00000408667 84 ntBASIC2.45□□□□□ -2.02
MBD4O95243 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD4O95243 USP9YP28-201ENST00000435142 589 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms