Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-447P-201ENST00000410293 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-355P-201ENST00000410427 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-791P-201ENST00000410467 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-233P-201ENST00000410845 141 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-860P-201ENST00000410860 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-785P-201ENST00000411324 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 MTCYBP29-201ENST00000436327 1006 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.28□□□□□ -2.45
USH2AO75445 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.28□□□□□ -2.45
USH2AO75445 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.28□□□□□ -2.45
USH2AO75445 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC-0.28□□□□□ -2.45
USH2AO75445 ELOCP24-201ENST00000456370 334 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNA5SP33-201ENST00000516687 98 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RN7SKP258-201ENST00000517151 304 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 MIR4765-201ENST00000585007 77 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 BNIP3P39-201ENST00000601077 554 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 U6.90-201ENST00000614007 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 U6.70-201ENST00000620287 104 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC119674.1-220ENST00000641502 1048 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU4-7P-201ENST00000364758 141 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-47P-201ENST00000383866 107 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AL035398.1-201ENST00000430869 322 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.28□□□□□ -2.45
USH2AO75445 RAB11AP1-201ENST00000442978 646 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AL096829.2-201ENST00000446582 742 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.28□□□□□ -2.45
USH2AO75445 ZNF886P-201ENST00000450781 723 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC048334.1-201ENST00000477975 159 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RPL30P1-201ENST00000488676 339 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
USH2AO75445 SNORA25.12-201ENST00000516202 82 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AL356057.1-201ENST00000533798 831 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.28□□□□□ -2.45
USH2AO75445 AC093838.1-201ENST00000613014 469 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC010133.1-201ENST00000615809 842 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC132825.6-201ENST00000638861 357 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC-0.28□□□□□ -2.45
USH2AO75445 CASC19-280ENST00000642102 1351 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-228P-201ENST00000362700 106 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-161P-201ENST00000363051 106 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNY1P11-201ENST00000363759 113 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 MIR493-201ENST00000385254 89 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 MIR1267-201ENST00000408723 78 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 MTCO2P34-201ENST00000421994 607 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC012308.1-201ENST00000451232 178 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 ADAM3B-201ENST00000569937 840 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC091135.1-201ENST00000585943 307 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AL353765.1-201ENST00000605514 183 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 AC006441.5-201ENST00000612680 209 ntBASIC-0.28□□□□□ -2.45
USH2AO75445 RNU6-727P-201ENST00000363592 107 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 SNORA25.7-201ENST00000364375 127 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 MIR145-201ENST00000384967 88 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 U8.15-201ENST00000390947 134 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RPS20P2-201ENST00000402520 389 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
USH2AO75445 PTGES3P1-201ENST00000439531 483 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
USH2AO75445 AC013267.1-201ENST00000458227 267 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.29□□□□□ -2.46
USH2AO75445 HMGN1P13-201ENST00000505795 138 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RNA5SP268-201ENST00000516828 124 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 AC022616.2-201ENST00000523185 300 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AC100767.1-201ENST00000528178 123 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 MTND4P33-201ENST00000556706 766 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 AL589743.7-201ENST00000612637 233 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
USH2AO75445 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RNU6-127P-201ENST00000390897 107 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL109913.1-201ENST00000421173 514 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AC093422.3-201ENST00000428506 305 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AC005094.1-201ENST00000440420 368 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.29□□□□□ -2.46
USH2AO75445 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.29□□□□□ -2.46
USH2AO75445 SCARNA18B-201ENST00000458806 135 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RPL37P6-201ENST00000460682 294 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.29□□□□□ -2.46
USH2AO75445 HMGB1P28-201ENST00000507778 552 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
USH2AO75445 RNU6-881P-201ENST00000516813 102 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 MIR4263-201ENST00000584745 83 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.29□□□□□ -2.46
USH2AO75445 AL355802.4-201ENST00000607635 548 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL136317.1-201ENST00000612653 226 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 AL162726.3-218ENST00000636401 95 ntBASIC-0.29□□□□□ -2.46
USH2AO75445 RNU7-21P-201ENST00000459430 62 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms