Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 Y_RNA.26-201ENST00000362539 101 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 Y_RNA.405-201ENST00000383979 100 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 Y_RNA.451-201ENST00000384200 100 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 SNORD116-20-201ENST00000384529 92 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 Y_RNA.524-201ENST00000384564 100 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 SNORA1.3-201ENST00000384676 136 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 Y_RNA.561-201ENST00000384694 100 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 MIR625-201ENST00000385047 85 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 MIR887-201ENST00000401258 79 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.42□□□□□ -2.02
LMX1BO60663 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.42□□□□□ -2.02
LMX1BO60663 RPL23AP95-201ENST00000426806 265 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 AC104332.2-201ENST00000429959 156 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC092423.1-201ENST00000430165 186 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 AC073910.1-201ENST00000445047 438 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AL590664.1-201ENST00000448065 339 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 AL109933.2-201ENST00000452651 260 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 U8.22-201ENST00000459141 133 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.42□□□□□ -2.02
LMX1BO60663 RPL30P1-201ENST00000488676 339 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AL590705.4-201ENST00000532209 134 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.42□□□□□ -2.02
LMX1BO60663 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 AC104581.2-201ENST00000572227 430 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 ZNF861P-201ENST00000588126 639 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1BO60663 AC006006.1-201ENST00000603082 144 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 RAC1P9-201ENST00000604990 392 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AL121655.1-201ENST00000605811 308 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC068831.7-201ENST00000616954 363 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 U2.1-201ENST00000618978 145 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 AC110491.1-201ENST00000562191 2010 ntBASIC2.42□□□□□ -2.02
LMX1BO60663 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.42□□□□□ -2.02
LMX1BO60663 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LMX1BO60663 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LMX1BO60663 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LMX1BO60663 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1BO60663 RNU6-238P-201ENST00000363313 106 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 RNU6-527P-201ENST00000363425 104 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 Y_RNA.210-201ENST00000364161 110 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 Y_RNA.222-201ENST00000364264 102 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 Y_RNA.424-201ENST00000384063 103 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 SNORA18.3-201ENST00000384122 132 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 RNU6-472P-201ENST00000384299 107 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 MIR190B-201ENST00000401119 79 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 RNU6-1077P-201ENST00000410506 102 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 RNU6-130P-201ENST00000411112 103 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 ELOCP20-201ENST00000422460 345 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 AL358453.1-201ENST00000422522 250 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.41□□□□□ -2.02
LMX1BO60663 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1BO60663 FCF1P4-201ENST00000448326 183 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1BO60663 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.41□□□□□ -2.02
LMX1BO60663 AC010099.1-201ENST00000455434 375 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.41□□□□□ -2.02
LMX1BO60663 snoU13.28-201ENST00000459235 104 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 Y_RNA.668-201ENST00000516233 93 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 RNU6-911P-201ENST00000516523 104 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.41□□□□□ -2.02
LMX1BO60663 AC006199.1-201ENST00000548728 219 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.41□□□□□ -2.02
LMX1BO60663 AL161670.1-201ENST00000554348 137 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 7SK.7-201ENST00000603504 247 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 AL450472.1-202ENST00000637286 180 ntBASIC2.41□□□□□ -2.02
LMX1BO60663 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LMX1BO60663 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LMX1BO60663 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.4□□□□□ -2.02
LMX1BO60663 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.4□□□□□ -2.02
LMX1BO60663 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.4□□□□□ -2.02
LMX1BO60663 AC096644.4-201ENST00000563417 2912 ntBASIC2.4□□□□□ -2.02
LMX1BO60663 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LMX1BO60663 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
LMX1BO60663 SNORD56.1-201ENST00000362913 68 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 Y_RNA.276-201ENST00000364732 109 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 RNU6-806P-201ENST00000365147 105 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 Y_RNA.551-201ENST00000384661 102 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 RNU6-700P-201ENST00000391043 107 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.4□□□□□ -2.03
LMX1BO60663 AL512633.1-201ENST00000399931 655 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1BO60663 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1BO60663 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.4□□□□□ -2.03
LMX1BO60663 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LMX1BO60663 AL513124.1-201ENST00000450410 614 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 AC108938.1-201ENST00000451204 136 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.4□□□□□ -2.03
LMX1BO60663 RPL26P9-201ENST00000457466 433 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 RN7SKP210-201ENST00000459176 261 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 RPL23AP75-201ENST00000491601 451 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 AF186996.7-201ENST00000492781 209 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 RPL23AP49-201ENST00000492925 468 ntBASIC2.4□□□□□ -2.03
LMX1BO60663 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms