Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA3O60609 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA3O60609 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA3O60609 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
GFRA3O60609 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA3O60609 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
GFRA3O60609 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA3O60609 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA3O60609 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA3O60609 Y_RNA.203-201ENST00000364106 102 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 SNORD61-201ENST00000384252 73 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 SNORA18-201ENST00000384416 132 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 RPL19P16-201ENST00000433839 588 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 RPS26P55-201ENST00000471178 356 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 RNU7-123P-201ENST00000515911 60 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 AC009163.5-201ENST00000575421 637 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 MIR3923-201ENST00000579521 83 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 MIR2681-201ENST00000581814 105 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 MIR5006-201ENST00000583027 110 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
GFRA3O60609 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA3O60609 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA3O60609 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA3O60609 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.4□□□□□ -1.71
GFRA3O60609 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA3O60609 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.4□□□□□ -1.71
GFRA3O60609 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.4□□□□□ -1.71
GFRA3O60609 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.4□□□□□ -1.71
GFRA3O60609 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.4□□□□□ -1.71
GFRA3O60609 PHKBP1-201ENST00000450951 1951 ntBASIC4.4□□□□□ -1.71
GFRA3O60609 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
GFRA3O60609 NOL8P1-201ENST00000508336 3529 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
GFRA3O60609 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA3O60609 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA3O60609 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA3O60609 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
GFRA3O60609 SNORA27.1-201ENST00000362604 124 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 Y_RNA.95-201ENST00000363079 95 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 Y_RNA.467-201ENST00000384297 102 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 Y_RNA.507-201ENST00000384500 99 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 AC009238.1-201ENST00000442165 424 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 AC009237.6-201ENST00000446969 424 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 AC125238.1-201ENST00000448842 249 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 AC245102.2-201ENST00000448956 180 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 AC010099.1-201ENST00000455434 375 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 RNU7-164P-201ENST00000459221 62 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 RNU6-63P-201ENST00000516690 95 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 RNU7-6P-201ENST00000516845 62 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 MIR6134-201ENST00000617606 109 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 MIR6852-201ENST00000621699 66 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
GFRA3O60609 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
GFRA3O60609 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA3O60609 AL672167.1-205ENST00000641112 3080 ntBASIC4.39□□□□□ -1.71
GFRA3O60609 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GFRA3O60609 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA3O60609 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GFRA3O60609 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GFRA3O60609 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
GFRA3O60609 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.38□□□□□ -1.71
GFRA3O60609 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.38□□□□□ -1.71
GFRA3O60609 U8.12-201ENST00000384701 133 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 MIR605-201ENST00000385078 83 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 EI24P2-201ENST00000397776 1076 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 RNU6-141P-201ENST00000410499 105 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 HMGN2P27-201ENST00000427352 270 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 AC008065.1-201ENST00000428525 348 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.38□□□□□ -1.71
GFRA3O60609 ABCF2P2-201ENST00000450549 296 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.38□□□□□ -1.71
GFRA3O60609 PCGEM1.1-201ENST00000613431 131 ntBASIC4.38□□□□□ -1.71
GFRA3O60609 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.38□□□□□ -1.71
GFRA3O60609 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GFRA3O60609 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.38□□□□□ -1.71
GFRA3O60609 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
GFRA3O60609 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.37□□□□□ -1.71
GFRA3O60609 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
GFRA3O60609 RNU6-363P-201ENST00000362895 105 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 SNORD58A-201ENST00000383875 65 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 AL031121.1-201ENST00000406553 254 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 RNA5SP511-201ENST00000410487 115 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 RNU6-733P-201ENST00000410759 104 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 RPL35AP21-201ENST00000437667 333 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 MLLT10P2-201ENST00000506434 249 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 AL121603.1-201ENST00000553815 142 ntBASIC4.37□□□□□ -1.71
GFRA3O60609 AC091544.4-201ENST00000555268 342 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms