Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC069528.2-201ENST00000624849 1991 ntBASIC4.73□□□□□ -1.65
ACTN4O43707 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ACTN4O43707 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.72□□□□□ -1.65
ACTN4O43707 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ACTN4O43707 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.72□□□□□ -1.65
ACTN4O43707 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.72□□□□□ -1.65
ACTN4O43707 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ACTN4O43707 SNORD114-7-201ENST00000362520 77 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 SNORD74.4-201ENST00000364129 80 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 Y_RNA.281-201ENST00000364774 94 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 RNU6-1107P-201ENST00000364817 104 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 SNORA72-201ENST00000384339 132 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 MIR585-201ENST00000384887 94 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 RPL23AP48-201ENST00000406913 488 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 AC126124.2-201ENST00000413542 321 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 AL135786.1-201ENST00000415892 214 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 HMGN2P32-201ENST00000444648 269 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.72□□□□□ -1.65
ACTN4O43707 RPS29P19-201ENST00000479709 171 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 AL592156.1-201ENST00000508758 304 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 RNA5SP49-201ENST00000516450 115 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 RNA5SP519-201ENST00000516480 119 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 RNU6-1337P-201ENST00000516525 95 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 RNU7-116P-201ENST00000516940 62 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.72□□□□□ -1.65
ACTN4O43707 MIR7702-201ENST00000621931 59 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 AC007256.1-201ENST00000392253 2765 ntBASIC4.72□□□□□ -1.65
ACTN4O43707 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ACTN4O43707 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ACTN4O43707 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.72□□□□□ -1.65
ACTN4O43707 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.72□□□□□ -1.65
ACTN4O43707 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.72□□□□□ -1.65
ACTN4O43707 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.71□□□□□ -1.65
ACTN4O43707 RNA5SP447-201ENST00000363749 119 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ACTN4O43707 RNU6-756P-201ENST00000383997 107 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 SNORD116-13-201ENST00000384408 92 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 SNORA1.3-201ENST00000384676 136 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.71□□□□□ -1.66
ACTN4O43707 RPL23AP82-202ENST00000427528 469 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 AC011998.1-201ENST00000433403 117 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 RPL23AP7-203ENST00000449021 469 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 RPL21P10-201ENST00000463521 490 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 CENPBD1P1-201ENST00000464061 469 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.71□□□□□ -1.66
ACTN4O43707 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.71□□□□□ -1.66
ACTN4O43707 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.71□□□□□ -1.66
ACTN4O43707 AL049861.1-201ENST00000603130 150 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 FAM27D1-201ENST00000612308 341 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 AL138880.2-201ENST00000616214 239 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ACTN4O43707 AC112484.5-201ENST00000624189 228 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.71□□□□□ -1.66
ACTN4O43707 MIR3199-2-201ENST00000636243 86 ntBASIC4.71□□□□□ -1.66
ACTN4O43707 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ACTN4O43707 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ACTN4O43707 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ACTN4O43707 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ACTN4O43707 AC006971.1-201ENST00000407916 4486 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ACTN4O43707 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ACTN4O43707 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.7□□□□□ -1.66
ACTN4O43707 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ACTN4O43707 AC004944.1-201ENST00000517807 3059 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ACTN4O43707 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ACTN4O43707 ZNF962P-201ENST00000443465 3140 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 MIR448-201ENST00000362131 111 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 RNU4-15P-201ENST00000362613 141 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 RNA5SP502-201ENST00000362694 119 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 MIR192-201ENST00000384915 110 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 MIR873-201ENST00000401120 77 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 AL732292.1-201ENST00000426692 226 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 RPS29P17-201ENST00000430795 166 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 AC107626.1-201ENST00000471084 183 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.7□□□□□ -1.66
ACTN4O43707 AL022345.2-201ENST00000606307 135 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 AP000346.3-201ENST00000622821 210 ntBASIC4.7□□□□□ -1.66
ACTN4O43707 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ACTN4O43707 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.7□□□□□ -1.66
ACTN4O43707 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ACTN4O43707 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ACTN4O43707 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
ACTN4O43707 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.69□□□□□ -1.66
ACTN4O43707 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ACTN4O43707 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ACTN4O43707 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
ACTN4O43707 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RNU6-529P-201ENST00000363383 104 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RNU1-132P-201ENST00000364300 164 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RNU6-49P-201ENST00000384256 107 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AL133475.1-201ENST00000404414 305 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RNU2-70P-201ENST00000410718 179 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RNA5SP306-201ENST00000411087 107 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RPL37P18-201ENST00000411602 243 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 EDDM3CP-201ENST00000415977 425 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AL161651.1-201ENST00000440882 223 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 RPS29P33-201ENST00000456717 146 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AC109327.1-201ENST00000471666 403 ntBASIC4.69□□□□□ -1.66
ACTN4O43707 AC145146.1-201ENST00000496370 254 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms