Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.92□□□□□ -1.94
PHGDHO43175 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PHGDHO43175 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PHGDHO43175 ZNF72P-201ENST00000425869 1908 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 Y_RNA.39-201ENST00000362620 98 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 Y_RNA.106-201ENST00000363189 100 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 SNORA38.1-201ENST00000364172 131 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 SNORA63C-201ENST00000364578 129 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 Y_RNA.319-201ENST00000365138 92 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 RNU6-378P-201ENST00000384324 107 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 MIR606-201ENST00000384851 96 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 MIR487A-201ENST00000385009 80 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 SNORA69.1-201ENST00000390904 137 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 SNORA46.1-201ENST00000391069 153 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 RNA5SP201-201ENST00000410316 124 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 RPS26P42-201ENST00000413485 326 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AL451074.5-201ENST00000415894 435 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC096644.2-201ENST00000429278 159 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.92□□□□□ -1.94
PHGDHO43175 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.92□□□□□ -1.94
PHGDHO43175 snoU13.22-201ENST00000459428 104 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC091179.1-201ENST00000461606 579 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 HMGN1P10-201ENST00000474557 553 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC008885.1-201ENST00000514930 301 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 RN7SKP282-201ENST00000516824 299 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC023442.1-201ENST00000531247 422 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.92□□□□□ -1.94
PHGDHO43175 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.92□□□□□ -1.94
PHGDHO43175 AC090616.3-201ENST00000582184 217 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.92□□□□□ -1.94
PHGDHO43175 AL356280.1-201ENST00000603614 379 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC007179.3-201ENST00000604976 235 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC004832.5-201ENST00000608677 401 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC005520.5-201ENST00000613926 164 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 AC087588.2-201ENST00000617667 426 ntBASIC2.92□□□□□ -1.94
PHGDHO43175 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
PHGDHO43175 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PHGDHO43175 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PHGDHO43175 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.91□□□□□ -1.94
PHGDHO43175 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PHGDHO43175 RNU4-42P-201ENST00000364738 142 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 Y_RNA.364-201ENST00000365532 101 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 RNU6-220P-201ENST00000390919 107 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 MIR887-201ENST00000401258 79 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 FO393413.1-201ENST00000402892 195 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 MTND2P23-201ENST00000422990 651 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 RPL21P2-201ENST00000440049 481 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 CHEK2P4-201ENST00000450340 246 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
PHGDHO43175 CKS1BP2-201ENST00000497342 240 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 ANXA2P1-201ENST00000505539 926 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.91□□□□□ -1.94
PHGDHO43175 SNORA25.10-201ENST00000515926 124 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.91□□□□□ -1.94
PHGDHO43175 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.91□□□□□ -1.94
PHGDHO43175 PCGEM1.1-201ENST00000613431 131 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 MIR5739-201ENST00000619803 80 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 AC073346.2-201ENST00000624724 2058 ntBASIC2.91□□□□□ -1.94
PHGDHO43175 MTND5P16-201ENST00000460269 1703 ntBASIC2.9□□□□□ -1.94
PHGDHO43175 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PHGDHO43175 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
PHGDHO43175 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 RNU6-222P-201ENST00000362438 107 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 RNU1-35P-201ENST00000362782 153 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 U3.9-201ENST00000363823 204 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 RNU6-1180P-201ENST00000364935 107 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 Y_RNA.358-201ENST00000365491 99 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 snosnR66.1-201ENST00000391095 99 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC114482.1-201ENST00000418010 247 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 USP9YP16-201ENST00000430287 407 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.9□□□□□ -1.95
PHGDHO43175 USP9YP23-201ENST00000455085 407 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AP000870.1-201ENST00000472927 406 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.9□□□□□ -1.95
PHGDHO43175 RNU6-1198P-201ENST00000516904 67 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 RNU6-586P-201ENST00000517265 104 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 HSPE1P18-201ENST00000517602 280 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.9□□□□□ -1.95
PHGDHO43175 AC027288.2-201ENST00000553028 243 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.9□□□□□ -1.95
PHGDHO43175 MIR5004-201ENST00000579078 107 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC005034.5-201ENST00000604219 466 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC116312.1-201ENST00000606841 314 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 AC096577.2-201ENST00000611455 153 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.9□□□□□ -1.95
PHGDHO43175 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.9□□□□□ -1.95
PHGDHO43175 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PHGDHO43175 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.89□□□□□ -1.95
PHGDHO43175 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
PHGDHO43175 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PHGDHO43175 RNU6-1274P-201ENST00000384557 107 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 SNORA12-201ENST00000391162 147 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 SNORD88.1-201ENST00000408684 91 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 Y_RNA.592-201ENST00000410274 109 ntBASIC2.89□□□□□ -1.95
PHGDHO43175 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.89□□□□□ -1.95
PHGDHO43175 AC113618.1-201ENST00000416747 285 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms