Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.7□□□□□ -2.14
MSH4O15457 AC015720.1-201ENST00000565251 277 ntBASIC1.7□□□□□ -2.14
MSH4O15457 MTND1P15-201ENST00000579262 949 ntBASIC1.7□□□□□ -2.14
MSH4O15457 PIGPP4-201ENST00000584447 307 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AP000654.2-201ENST00000605633 586 ntBASIC1.7□□□□□ -2.14
MSH4O15457 AL773524.1-201ENST00000614065 229 ntBASIC1.7□□□□□ -2.14
MSH4O15457 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
MSH4O15457 Y_RNA.99-201ENST00000363138 105 ntBASIC1.69□□□□□ -2.14
MSH4O15457 SNORD32B-201ENST00000364460 84 ntBASIC1.69□□□□□ -2.14
MSH4O15457 Y_RNA.255-201ENST00000364581 97 ntBASIC1.69□□□□□ -2.14
MSH4O15457 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.69□□□□□ -2.14
MSH4O15457 RNA5SP219-201ENST00000390940 113 ntBASIC1.69□□□□□ -2.14
MSH4O15457 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
MSH4O15457 MIR1304-201ENST00000408243 91 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AL513185.2-201ENST00000425543 193 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AL121601.2-201ENST00000438019 707 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.69□□□□□ -2.14
MSH4O15457 RPL23AP6-201ENST00000446637 472 ntBASIC1.69□□□□□ -2.14
MSH4O15457 MTCO2P18-201ENST00000457151 658 ntBASIC1.69□□□□□ -2.14
MSH4O15457 TPT1P7-201ENST00000458300 517 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AC087884.1-201ENST00000469738 328 ntBASIC1.69□□□□□ -2.14
MSH4O15457 CCDC34P1-201ENST00000507441 517 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AC091133.4-201ENST00000511142 308 ntBASIC1.69□□□□□ -2.14
MSH4O15457 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.69□□□□□ -2.14
MSH4O15457 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.69□□□□□ -2.14
MSH4O15457 AC090115.3-201ENST00000553218 849 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.69□□□□□ -2.14
MSH4O15457 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
MSH4O15457 MIR3611-201ENST00000584484 83 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AC023043.2-201ENST00000589678 1026 ntBASIC1.69□□□□□ -2.14
MSH4O15457 AC016727.1-205ENST00000605437 569 ntBASIC1.69□□□□□ -2.14
MSH4O15457 uc_338.5-201ENST00000611839 155 ntBASIC1.69□□□□□ -2.14
MSH4O15457 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
MSH4O15457 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
MSH4O15457 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
MSH4O15457 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
MSH4O15457 RNU1-58P-201ENST00000362413 163 ntBASIC1.68□□□□□ -2.14
MSH4O15457 RNU4-56P-201ENST00000364700 142 ntBASIC1.68□□□□□ -2.14
MSH4O15457 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
MSH4O15457 SNORD37.1-201ENST00000390968 65 ntBASIC1.68□□□□□ -2.14
MSH4O15457 RNU6-174P-201ENST00000410406 106 ntBASIC1.68□□□□□ -2.14
MSH4O15457 RN7SKP61-201ENST00000410642 295 ntBASIC1.68□□□□□ -2.14
MSH4O15457 BTF3P4-201ENST00000418852 495 ntBASIC1.68□□□□□ -2.14
MSH4O15457 AC078809.1-201ENST00000427601 140 ntBASIC1.68□□□□□ -2.14
MSH4O15457 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.68□□□□□ -2.14
MSH4O15457 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.68□□□□□ -2.14
MSH4O15457 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.68□□□□□ -2.14
MSH4O15457 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.68□□□□□ -2.14
MSH4O15457 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.68□□□□□ -2.14
MSH4O15457 MIR4498-201ENST00000577599 66 ntBASIC1.68□□□□□ -2.14
MSH4O15457 AL356157.2-201ENST00000605122 111 ntBASIC1.68□□□□□ -2.14
MSH4O15457 AL022345.1-201ENST00000607292 135 ntBASIC1.68□□□□□ -2.14
MSH4O15457 HULC.1-201ENST00000612720 240 ntBASIC1.68□□□□□ -2.14
MSH4O15457 AC005296.1-201ENST00000616145 209 ntBASIC1.68□□□□□ -2.14
MSH4O15457 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
MSH4O15457 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.68□□□□□ -2.14
MSH4O15457 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
MSH4O15457 AC092268.1-201ENST00000342691 405 ntBASIC1.67□□□□□ -2.14
MSH4O15457 RNU6-1119P-201ENST00000384349 108 ntBASIC1.67□□□□□ -2.14
MSH4O15457 SNORA8-201ENST00000384574 139 ntBASIC1.67□□□□□ -2.14
MSH4O15457 RNA5SP212-201ENST00000391223 107 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AL357139.1-201ENST00000407792 426 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.67□□□□□ -2.14
MSH4O15457 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.67□□□□□ -2.14
MSH4O15457 RPL23AP36-201ENST00000413895 458 ntBASIC1.67□□□□□ -2.14
MSH4O15457 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MSH4O15457 AC016907.1-201ENST00000419483 435 ntBASIC1.67□□□□□ -2.14
MSH4O15457 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AL354695.1-201ENST00000427935 228 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.67□□□□□ -2.14
MSH4O15457 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.67□□□□□ -2.14
MSH4O15457 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.67□□□□□ -2.14
MSH4O15457 SNORA40.12-201ENST00000516329 111 ntBASIC1.67□□□□□ -2.14
MSH4O15457 SNORA31.24-201ENST00000517232 57 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.67□□□□□ -2.14
MSH4O15457 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.67□□□□□ -2.14
MSH4O15457 MIR4424-201ENST00000585257 86 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AC087683.1-201ENST00000591187 441 ntBASIC1.67□□□□□ -2.14
MSH4O15457 AL078605.1-201ENST00000603529 500 ntBASIC1.67□□□□□ -2.14
MSH4O15457 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MSH4O15457 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
MSH4O15457 Y_RNA.504-201ENST00000384481 104 ntBASIC1.66□□□□□ -2.14
MSH4O15457 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
MSH4O15457 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.66□□□□□ -2.14
MSH4O15457 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.66□□□□□ -2.14
MSH4O15457 RPL31P63-201ENST00000422565 375 ntBASIC1.66□□□□□ -2.14
MSH4O15457 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.66□□□□□ -2.14
MSH4O15457 RPL23AP95-201ENST00000426806 265 ntBASIC1.66□□□□□ -2.14
MSH4O15457 USP9YP14-201ENST00000430663 563 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AL133396.1-201ENST00000432048 687 ntBASIC1.66□□□□□ -2.14
MSH4O15457 Z83846.1-201ENST00000446798 265 ntBASIC1.66□□□□□ -2.14
MSH4O15457 RNU7-138P-201ENST00000459479 64 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC016632.1-201ENST00000503994 196 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.66□□□□□ -2.14
MSH4O15457 AC091874.1-201ENST00000511402 339 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AC108729.3-201ENST00000513484 108 ntBASIC1.66□□□□□ -2.14
MSH4O15457 RNA5SP490-201ENST00000517141 136 ntBASIC1.66□□□□□ -2.14
MSH4O15457 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms