Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL356583.2-201ENST00000426536 280 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC010975.2-201ENST00000427781 588 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.88□□□□□ -2.27
UBFD1O14562 AC104850.1-201ENST00000435940 476 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.88□□□□□ -2.27
UBFD1O14562 AC027119.1-201ENST00000440877 241 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 DYNLT3P2-201ENST00000442517 295 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC016700.2-201ENST00000446011 156 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.88□□□□□ -2.27
UBFD1O14562 GAPDHP17-201ENST00000449858 1001 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 snoU13.30-201ENST00000458951 104 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 RPL9P9-202ENST00000466501 579 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 HMGN2P9-201ENST00000476875 229 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC015911.1-201ENST00000495111 156 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AL133373.1-201ENST00000497098 94 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 HMGN1P13-201ENST00000505795 138 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC116562.3-201ENST00000506136 177 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.88□□□□□ -2.27
UBFD1O14562 AC005741.1-201ENST00000511094 432 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC074344.1-201ENST00000512823 224 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.88□□□□□ -2.27
UBFD1O14562 AC068587.5-201ENST00000528506 175 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.88□□□□□ -2.27
UBFD1O14562 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.88□□□□□ -2.27
UBFD1O14562 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.88□□□□□ -2.27
UBFD1O14562 MTND1P8-201ENST00000571424 950 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.88□□□□□ -2.27
UBFD1O14562 AP003465.2-201ENST00000602571 373 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AL359999.1-201ENST00000604513 294 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC091304.9-201ENST00000612091 226 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AL078604.3-201ENST00000615580 211 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 MIR6767-201ENST00000637302 66 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.88□□□□□ -2.27
UBFD1O14562 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.87□□□□□ -2.27
UBFD1O14562 RNU6-500P-201ENST00000362349 107 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 RNA5SP327-201ENST00000362494 101 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 RNU6-862P-201ENST00000362804 105 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 RNU6-336P-201ENST00000364891 107 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 Y_RNA.324-201ENST00000365165 102 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 RNU5E-5P-201ENST00000365379 116 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.87□□□□□ -2.27
UBFD1O14562 RNU6-142P-201ENST00000384019 107 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 MTCYBP2-201ENST00000407745 171 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC098592.1-201ENST00000419352 333 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 MTCYBP39-201ENST00000437562 491 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 MTCYBP1-201ENST00000454315 1119 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC022447.4-201ENST00000504053 364 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.87□□□□□ -2.27
UBFD1O14562 RNU6-377P-201ENST00000515965 102 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 Y_RNA.672-201ENST00000516289 104 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 RNU2-46P-201ENST00000517038 113 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.87□□□□□ -2.27
UBFD1O14562 AC115990.1-201ENST00000526957 301 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC021231.3-201ENST00000558497 370 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 HMGB1P33-201ENST00000563485 527 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC012414.6-201ENST00000568241 401 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 MTATP6P3-201ENST00000581686 676 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC008751.2-201ENST00000597885 980 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
UBFD1O14562 AL121890.5-201ENST00000620848 304 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC006927.3-201ENST00000638789 384 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 AC106754.1-201ENST00000562632 1513 ntBASIC0.87□□□□□ -2.27
UBFD1O14562 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
UBFD1O14562 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.86□□□□□ -2.27
UBFD1O14562 RNA5SP325-201ENST00000363756 130 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 SNORA20.2-201ENST00000383922 131 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 RNU6-1105P-201ENST00000384774 107 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.86□□□□□ -2.27
UBFD1O14562 AC106883.1-201ENST00000418805 562 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.86□□□□□ -2.27
UBFD1O14562 AC244670.1-201ENST00000436879 112 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 GTF2IP13-201ENST00000438487 386 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 RPS27P1-201ENST00000450552 247 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AL133217.1-201ENST00000450980 425 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 ZNF114P1-201ENST00000453500 292 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 RNA5SP269-201ENST00000459032 137 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.86□□□□□ -2.27
UBFD1O14562 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.86□□□□□ -2.27
UBFD1O14562 RNU6-1098P-201ENST00000516772 96 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AP001893.2-201ENST00000526949 202 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.86□□□□□ -2.27
UBFD1O14562 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.86□□□□□ -2.27
UBFD1O14562 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.86□□□□□ -2.27
UBFD1O14562 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.86□□□□□ -2.27
UBFD1O14562 MIR5000-201ENST00000577717 103 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AC011712.1-201ENST00000588959 234 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AC112191.3-201ENST00000604371 277 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 AP000240.1-201ENST00000609910 452 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
UBFD1O14562 AC011155.2-201ENST00000623202 216 ntBASIC0.86□□□□□ -2.27
UBFD1O14562 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.86□□□□□ -2.27
UBFD1O14562 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
UBFD1O14562 SNORD32A-201ENST00000364805 84 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 RNU6-715P-201ENST00000365204 103 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 SNORA32.2-201ENST00000384049 122 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 RNU6-360P-201ENST00000390944 104 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 RNU6-550P-201ENST00000391057 101 ntBASIC0.85□□□□□ -2.27
UBFD1O14562 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms