Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AL030996.1-201ENST00000411430 235 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 NCOR1P3-201ENST00000420479 303 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 RNU7-138P-201ENST00000459479 64 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 AC130509.1-201ENST00000464158 433 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 RPS3AP17-201ENST00000472594 777 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 AC091874.1-201ENST00000511402 339 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.86□□□□□ -2.11
DDX39AO00148 CYP4A27P-201ENST00000567218 190 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 MIR3198-2-201ENST00000577868 80 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 AC010900.2-201ENST00000604508 210 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 PCGEM1.1-201ENST00000613431 131 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
DDX39AO00148 AL354950.2-201ENST00000617939 290 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.86□□□□□ -2.11
DDX39AO00148 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.86□□□□□ -2.11
DDX39AO00148 ELL2P3-201ENST00000457883 1602 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
DDX39AO00148 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
DDX39AO00148 RNA5SP219-201ENST00000390940 113 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AP000275.1-201ENST00000411943 390 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.85□□□□□ -2.11
DDX39AO00148 MTCO2P19-201ENST00000427513 598 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AC108667.1-201ENST00000428618 249 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AC087884.1-201ENST00000469738 328 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AL163973.1-201ENST00000484753 577 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AC008628.2-201ENST00000502605 298 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 HMGB1P29-201ENST00000505659 499 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 ATP5EP1-201ENST00000510257 156 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 RNA5SP458-201ENST00000516188 119 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
DDX39AO00148 EIF4A1P12-201ENST00000551910 141 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX39AO00148 MTND3P12-201ENST00000559068 328 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX39AO00148 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX39AO00148 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.85□□□□□ -2.11
DDX39AO00148 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 MIR3974-201ENST00000637126 96 ntBASIC1.85□□□□□ -2.11
DDX39AO00148 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
DDX39AO00148 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
DDX39AO00148 SNORA32.2-201ENST00000384049 122 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AC090960.1-201ENST00000421072 306 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AL121601.2-201ENST00000438019 707 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.84□□□□□ -2.11
DDX39AO00148 MTCO2P3-201ENST00000442543 421 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 SNRPEP8-201ENST00000442866 260 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.84□□□□□ -2.11
DDX39AO00148 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.84□□□□□ -2.11
DDX39AO00148 MTCO2P18-201ENST00000457151 658 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.11
DDX39AO00148 RNU5F-4P-201ENST00000516581 114 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.84□□□□□ -2.11
DDX39AO00148 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.84□□□□□ -2.11
DDX39AO00148 AC007684.1-201ENST00000609671 477 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 HULC.1-201ENST00000612720 240 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AL136221.1-201ENST00000621449 509 ntBASIC1.84□□□□□ -2.11
DDX39AO00148 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.84□□□□□ -2.11
DDX39AO00148 AC245060.5-201ENST00000610778 3293 ntBASIC1.84□□□□□ -2.12
DDX39AO00148 Y_RNA.1-201ENST00000352915 104 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 Y_RNA.255-201ENST00000364581 97 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 RNU6-378P-201ENST00000384324 107 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 RNU6-1158P-201ENST00000391167 107 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 MIR208B-201ENST00000401172 77 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 RNU2-41P-201ENST00000410991 178 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 AC112492.4-201ENST00000456549 352 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 CCDC34P1-201ENST00000507441 517 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.83□□□□□ -2.12
DDX39AO00148 CBX3P4-201ENST00000538909 354 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 HSBP1P1-201ENST00000555205 166 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.83□□□□□ -2.12
DDX39AO00148 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.83□□□□□ -2.12
DDX39AO00148 AP000942.3-201ENST00000603702 160 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 AL450472.1-202ENST00000637286 180 ntBASIC1.83□□□□□ -2.12
DDX39AO00148 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
DDX39AO00148 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
DDX39AO00148 RNU6-661P-201ENST00000362409 107 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 SNORA36A-201ENST00000384221 132 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 MIR30A-201ENST00000385092 71 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 SNORD73A-201ENST00000386062 65 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 SNORD37.1-201ENST00000390968 65 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 AC139712.2-201ENST00000424302 339 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 AC027575.1-201ENST00000481064 460 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 SNORA14.1-201ENST00000516113 141 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.82□□□□□ -2.12
DDX39AO00148 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.82□□□□□ -2.12
DDX39AO00148 VN1R80P-201ENST00000597126 338 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
DDX39AO00148 RPL17P51-201ENST00000605218 238 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms