Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CCDC188H7C350 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC188H7C350 AC233981.2-201ENST00000611524 1614 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 Y_RNA.123-201ENST00000363338 102 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC188H7C350 Y_RNA.554-201ENST00000384672 102 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC188H7C350 MTND1P34-201ENST00000438556 671 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC188H7C350 AC007547.1-201ENST00000462177 490 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 AC091435.1-201ENST00000505442 584 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 AC092436.3-201ENST00000511788 257 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC188H7C350 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC188H7C350 TPRKBP2-201ENST00000565969 475 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC188H7C350 AL132822.1-201ENST00000617063 513 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.11□□□□□ -2.07
CCDC188H7C350 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC188H7C350 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC188H7C350 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 Y_RNA.256-201ENST00000364594 104 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 RNU6-128P-201ENST00000383976 107 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 RNU6-26P-201ENST00000383985 107 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 Y_RNA.450-201ENST00000384198 113 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 Y_RNA.453-201ENST00000384223 109 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 Y_RNA.530-201ENST00000384587 101 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CCDC188H7C350 RNU6-332P-201ENST00000391193 108 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 MIR1262-201ENST00000408276 93 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC188H7C350 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC188H7C350 HMGN2P26-201ENST00000463169 339 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 RN7SL274P-201ENST00000492268 272 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC188H7C350 TRBVA-201ENST00000498804 316 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC021146.2-201ENST00000504736 556 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC093259.1-201ENST00000509755 300 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC096745.1-201ENST00000509945 370 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC188H7C350 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC188H7C350 SCOCP1-201ENST00000554676 349 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC188H7C350 AC090517.1-201ENST00000569307 266 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC188H7C350 CTHRC1P1-201ENST00000605383 469 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AL136221.1-201ENST00000621449 509 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 MIR7843-201ENST00000622274 79 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC130454.1-201ENST00000622948 401 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 AC064859.1-201ENST00000624741 174 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 MTND5P6-201ENST00000422338 1798 ntBASIC2.1□□□□□ -2.07
CCDC188H7C350 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC188H7C350 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC188H7C350 RNA5SP289-201ENST00000362332 137 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU6-1159P-201ENST00000362933 107 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 Y_RNA.295-201ENST00000364918 102 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU6-234P-201ENST00000365229 104 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU6-438P-201ENST00000365561 103 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU6-968P-201ENST00000384076 107 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU6-1026P-201ENST00000384465 108 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 SNORA26.3-201ENST00000391119 136 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 SNORD115-47-201ENST00000391226 86 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 MTCYBP2-201ENST00000407745 171 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU2-48P-201ENST00000410694 191 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RN7SKP192-201ENST00000411291 327 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 SNRPEP10-201ENST00000420249 274 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC012306.1-201ENST00000423267 114 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 C8orf59P1-201ENST00000429930 303 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC188H7C350 snoU13.26-201ENST00000459452 105 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 ANXA2P1-201ENST00000505539 926 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC005741.1-201ENST00000511094 432 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU5F-4P-201ENST00000516581 114 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 RNU6-273P-201ENST00000516937 96 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC188H7C350 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC188H7C350 ANP32BP3-201ENST00000559213 706 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC026464.5-201ENST00000562497 722 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC188H7C350 AL078605.1-201ENST00000603529 500 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC093913.1-201ENST00000614178 329 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 FAM157A-202ENST00000615155 405 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC024614.3-201ENST00000637860 256 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 AC100810.6-201ENST00000638068 285 ntBASIC2.09□□□□□ -2.07
CCDC188H7C350 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CCDC188H7C350 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
CCDC188H7C350 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC188H7C350 RNY4P14-201ENST00000363656 96 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms