Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RPL21P2-201ENST00000440049 481 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.57□□□□□ -2
NPIPB4C9JG80 AL035666.1-201ENST00000446195 348 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.57□□□□□ -2
NPIPB4C9JG80 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.57□□□□□ -2
NPIPB4C9JG80 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.57□□□□□ -2
NPIPB4C9JG80 AC091826.1-201ENST00000514065 313 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 SCARNA13-201ENST00000516672 275 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.57□□□□□ -2
NPIPB4C9JG80 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.57□□□□□ -2
NPIPB4C9JG80 AL355802.3-201ENST00000607571 545 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 PCGEM1.1-201ENST00000613431 131 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 AC135776.4-201ENST00000624300 1904 ntBASIC2.57□□□□□ -2
NPIPB4C9JG80 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPB4C9JG80 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
NPIPB4C9JG80 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPIPB4C9JG80 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.57□□□□□ -2
NPIPB4C9JG80 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.56□□□□□ -2
NPIPB4C9JG80 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 RNU6-541P-201ENST00000384709 110 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 RNU6-1093P-201ENST00000391194 107 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 AL161788.1-201ENST00000441805 169 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.56□□□□□ -2
NPIPB4C9JG80 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.56□□□□□ -2
NPIPB4C9JG80 TOMM22P6-201ENST00000465035 409 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 AC105758.1-201ENST00000506038 399 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 Y_RNA.661-201ENST00000516003 99 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 SNORA9.3-201ENST00000516383 129 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 RNU6-1153P-201ENST00000516760 105 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 RNA5SP54-201ENST00000516951 92 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 AC144568.1-201ENST00000520139 137 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 AC023442.1-201ENST00000531247 422 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 EIF4A1P12-201ENST00000551910 141 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 AL356055.1-201ENST00000602528 446 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.56□□□□□ -2
NPIPB4C9JG80 MAPK10-266ENST00000641066 6555 ntBASIC2.56□□□□□ -2
NPIPB4C9JG80 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.56□□□□□ -2
NPIPB4C9JG80 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPIPB4C9JG80 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.55□□□□□ -2
NPIPB4C9JG80 SNORD115-8-201ENST00000363856 82 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 SNORD115-38-201ENST00000365037 82 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 Y_RNA.314-201ENST00000365114 102 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 Y_RNA.319-201ENST00000365138 92 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 RNU1-115P-201ENST00000365329 160 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 RNU6-474P-201ENST00000384243 107 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 RNU6-378P-201ENST00000384324 107 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 MIR95-201ENST00000385072 81 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
NPIPB4C9JG80 MRPS18CP6-201ENST00000423587 223 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 BX510359.1-201ENST00000456973 237 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 AC090515.1-201ENST00000465295 476 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 RPL7P49-201ENST00000471402 708 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.55□□□□□ -2
NPIPB4C9JG80 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.55□□□□□ -2
NPIPB4C9JG80 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.55□□□□□ -2
NPIPB4C9JG80 AC091144.1-201ENST00000519573 138 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 AL442663.2-201ENST00000554385 511 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.55□□□□□ -2
NPIPB4C9JG80 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 MIR1254-2-201ENST00000579553 63 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
NPIPB4C9JG80 AL356575.1-201ENST00000603008 283 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 SNRPGP17-201ENST00000603780 214 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 MIR1244-1-201ENST00000612829 85 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 AC091925.1-201ENST00000623204 462 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 MIR1244-3-201ENST00000635744 85 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 MIR1244-2-201ENST00000636449 85 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 MIR1244-4-202ENST00000636813 85 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.55□□□□□ -2
NPIPB4C9JG80 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.55□□□□□ -2
NPIPB4C9JG80 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
NPIPB4C9JG80 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPB4C9JG80 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NPIPB4C9JG80 Y_RNA.364-201ENST00000365532 101 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 XGY1-201ENST00000381172 446 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 RNU6-1032P-201ENST00000384100 107 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 RNU6-1274P-201ENST00000384557 107 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 MIR23B-201ENST00000384832 97 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 SNORA69.1-201ENST00000390904 137 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 RPL19P1-201ENST00000411635 428 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.54□□□□□ -2
NPIPB4C9JG80 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
NPIPB4C9JG80 AC003685.2-201ENST00000422795 395 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 MTCYBP6-201ENST00000441810 138 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 AC104389.3-201ENST00000445629 235 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 AC090096.1-201ENST00000489168 390 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 ANXA2P1-201ENST00000505539 926 ntBASIC2.54□□□□□ -2
NPIPB4C9JG80 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
NPIPB4C9JG80 RNA5SP385-201ENST00000515947 110 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms