Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 Y_RNA.498-201ENST00000384460 102 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 MIR767-201ENST00000390228 109 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 RNA5SP424-201ENST00000390988 115 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 RPL19P1-201ENST00000411635 428 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 COX6CP10-201ENST00000416832 224 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 CYCSP4-201ENST00000429682 331 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 RN7SKP57-201ENST00000517248 293 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 AC087441.2-201ENST00000529141 262 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 RPS15AP11-201ENST00000594193 385 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 AC012493.2-201ENST00000595083 291 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 MZT1P2-201ENST00000604387 248 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 SNRPGP20-201ENST00000604477 205 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 AC073349.3-201ENST00000617616 186 ntBASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
UPK3BL1B0FP48 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU6-1010P-201ENST00000362757 107 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU1-35P-201ENST00000362782 153 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 SNORD114-19-201ENST00000363072 75 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU6-799P-201ENST00000363567 107 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNA5SP51-201ENST00000364750 119 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 SNORA72.2-201ENST00000365028 127 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU6-1289P-201ENST00000384431 106 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNA5SP252-201ENST00000391131 119 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU6-651P-201ENST00000411040 105 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 UQCRBP2-201ENST00000447827 297 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU6-625P-201ENST00000459412 107 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 TRBV12-2-201ENST00000489763 344 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 RNU5F-2P-201ENST00000516066 82 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 SCARNA15.3-201ENST00000626315 122 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 SCARNA4.1-201ENST00000628597 123 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
UPK3BL1B0FP48 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AL512633.1-201ENST00000399931 655 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 snoU13.14-201ENST00000459372 104 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 RNU6-861P-201ENST00000516745 106 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 Y_RNA.703-201ENST00000516846 111 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 RNU6-255P-201ENST00000516957 105 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AC244505.7-201ENST00000599675 272 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AC010620.2-201ENST00000600135 313 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AL391813.1-201ENST00000603098 260 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 U6.106-201ENST00000636360 105 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AC135776.4-201ENST00000624300 1904 ntBASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.73□□□□□ -1.81
UPK3BL1B0FP48 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 AL157777.2-201ENST00000258070 137 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 ELOCP21-201ENST00000412558 336 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 MRPS10P1-201ENST00000448483 130 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 RNU6-711P-201ENST00000517255 106 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 AP005660.1-201ENST00000522972 293 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 RPL21P9-201ENST00000556149 474 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 AP000553.6-201ENST00000641242 118 ntBASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
UPK3BL1B0FP48 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
UPK3BL1B0FP48 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 RNA5SP50-201ENST00000363731 107 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 Y_RNA.217-201ENST00000364214 105 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 RNU6-47P-201ENST00000383866 107 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 MIR208B-201ENST00000401172 77 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 CBX3P9-201ENST00000402326 552 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 RAB28P5-201ENST00000427490 651 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 BX510359.1-201ENST00000456973 237 ntBASIC3.71□□□□□ -1.82
UPK3BL1B0FP48 AL031183.1-201ENST00000457667 207 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms