Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AL353705.1-201ENST00000433468 480 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RPL21P39-201ENST00000463605 483 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC087190.1-201ENST00000484462 480 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC107032.1-201ENST00000485945 480 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC093591.1-201ENST00000491435 481 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RPL21P16-201ENST00000495531 483 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 BTF3L4P4-201ENST00000506381 449 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RNA5SP112-201ENST00000515937 99 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RNU6-1114P-201ENST00000516022 107 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RN7SKP272-201ENST00000516988 232 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 AC079600.2-201ENST00000550076 130 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 ZNF72P-201ENST00000425869 1908 ntBASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC85CA6NKD9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 RNU6-655P-201ENST00000362858 107 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 RNU4-56P-201ENST00000364700 142 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.319-201ENST00000365138 92 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.358-201ENST00000365491 99 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 RNY3P4-201ENST00000384428 101 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 MIR628-201ENST00000385229 95 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 RNA5SP39-201ENST00000411245 120 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 HMGB3P2-201ENST00000411913 584 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AC114482.1-201ENST00000418010 247 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AL513328.1-201ENST00000446460 224 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 U8.20-201ENST00000459445 131 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 RNU7-169P-201ENST00000459456 61 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AC007215.1-201ENST00000464893 276 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 RPS27AP9-201ENST00000477681 438 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.715-201ENST00000517082 110 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 IGHV3-76-201ENST00000522465 295 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AC008739.2-201ENST00000597006 317 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AL138963.2-201ENST00000605137 226 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 AL132822.1-201ENST00000617063 513 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 Z75746.1-201ENST00000440243 2080 ntBASIC3.63□□□□□ -1.83
CCDC85CA6NKD9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.27-201ENST00000362540 103 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 RNU6-1159P-201ENST00000362933 107 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 RNU4-50P-201ENST00000364361 141 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 SNORA68.1-201ENST00000364537 132 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.508-201ENST00000384502 114 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.557-201ENST00000384680 107 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 MIR184-201ENST00000384962 84 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 EIF4EP4-201ENST00000424916 578 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 EIF1P2-201ENST00000428233 350 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 USP9YP16-201ENST00000430287 407 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AC245517.4-201ENST00000448601 281 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 USP9YP23-201ENST00000455085 407 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 RPS3P1-201ENST00000456781 192 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 RPL23AP70-201ENST00000483361 460 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AC017037.1-201ENST00000508460 471 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 MIR4765-201ENST00000585007 77 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AL356575.1-201ENST00000603008 283 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AC124312.5-201ENST00000604451 268 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 PRR13P7-201ENST00000605538 430 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 AC008121.3-201ENST00000618726 433 ntBASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC85CA6NKD9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AP006437.1-201ENST00000641440 3685 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 RNU6-486P-201ENST00000363116 107 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.276-201ENST00000364732 109 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 Y_RNA.551-201ENST00000384661 102 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 RNU6-159P-201ENST00000391080 106 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AL356057.3-201ENST00000402607 340 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 Z98742.2-201ENST00000431564 187 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 RPL23AP22-201ENST00000437556 453 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 RPS15AP7-201ENST00000439294 405 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AC073910.1-201ENST00000445047 438 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 RPS29P12-201ENST00000460178 152 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AC146507.2-201ENST00000460608 476 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AP000870.1-201ENST00000472927 406 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AL049830.2-201ENST00000480072 201 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 RNA5SP54-201ENST00000516951 92 ntBASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC85CA6NKD9 MIR3923-201ENST00000579521 83 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms