Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC092268.1-201ENST00000342691 405 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 SNORA3A-201ENST00000364113 130 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 SNORA25B-201ENST00000365507 128 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 XGY1-201ENST00000381172 446 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 RNU6-546P-201ENST00000383991 107 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 MIR29B2-201ENST00000385055 81 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 MIR561-201ENST00000385216 97 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 SNORA46.1-201ENST00000391069 153 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC009963.1-201ENST00000417265 157 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 RPL21P111-201ENST00000418453 477 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 WARS2P1-201ENST00000429678 537 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 FTH1P25-201ENST00000447665 469 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 FO393415.2-201ENST00000480085 343 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC022447.4-201ENST00000504053 364 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 SNORA48.11-201ENST00000517015 89 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC109446.1-201ENST00000566172 220 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 MIR3136-201ENST00000583498 78 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AL356157.2-201ENST00000605122 111 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC124303.1-201ENST00000605703 360 ntBASIC2.01□□□□□ -2.09
NKX6-3A6NJ46 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
NKX6-3A6NJ46 ZNF658B-202ENST00000615961 3375 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
NKX6-3A6NJ46 Y_RNA.184-201ENST00000363884 108 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 RNA5SP126-201ENST00000365092 109 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 RNU6-142P-201ENST00000384019 107 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 RNU6-968P-201ENST00000384076 107 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 SNORA29-201ENST00000384183 140 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 RNU6-378P-201ENST00000384324 107 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 MIR95-201ENST00000385072 81 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 MIR208B-201ENST00000401172 77 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AL139396.1-201ENST00000421137 167 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AL353705.4-201ENST00000449661 238 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 MTND4P17-201ENST00000470444 350 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC018868.1-201ENST00000491307 315 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC116353.2-201ENST00000505332 712 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC103851.1-201ENST00000506833 274 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AL117351.2-201ENST00000513571 157 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 RNU1-54P-201ENST00000517181 120 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 RNU6-667P-201ENST00000517186 102 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 MIR3923-201ENST00000579521 83 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 RBM11P1-201ENST00000604951 799 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC018889.1-201ENST00000605372 397 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 AC099654.14-201ENST00000638599 341 ntBASIC2□□□□□ -2.09
NKX6-3A6NJ46 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2□□□□□ -2.09
NKX6-3A6NJ46 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AP000560.1-201ENST00000624150 1937 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 RNU6-845P-201ENST00000362578 103 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 SNORD115-3-201ENST00000363100 82 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 Y_RNA.279-201ENST00000364763 95 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 U8.8-201ENST00000365399 135 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MIR549A-201ENST00000385268 96 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MTCO3P46-201ENST00000425787 232 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 USP9YP30-201ENST00000430729 455 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 RPS3AP52-201ENST00000435639 297 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MTND1P17-201ENST00000448961 204 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MTND5P5-201ENST00000503764 376 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 ACA59.1-201ENST00000515966 143 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AC021231.3-201ENST00000558497 370 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MIR4801-201ENST00000582704 82 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AC005730.3-201ENST00000583067 366 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 MIR4298-201ENST00000584380 73 ntBASIC1.99□□□□□ -2.09
NKX6-3A6NJ46 AC103810.6-201ENST00000606708 136 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms