Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AC013470.1-201ENST00000453438 462 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 RNU7-138P-201ENST00000459479 64 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AL121594.1-201ENST00000475906 575 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 SNORA19.2-201ENST00000516013 114 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.665-201ENST00000516177 98 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 SNORD60.2-201ENST00000516883 86 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AC069113.1-201ENST00000517763 267 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 CYCSP27-201ENST00000527643 293 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AC109635.3-201ENST00000529536 185 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AP000763.2-201ENST00000540641 163 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AL157687.1-201ENST00000554853 619 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 MIR4287-201ENST00000579398 78 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 MIR3941-201ENST00000582572 103 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 ELOCP5-201ENST00000604924 333 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 AC068944.2-201ENST00000610373 403 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 MIR5739-201ENST00000619803 80 ntBASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
NKX2-6A6NCS4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 RNU6-655P-201ENST00000362858 107 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 RNU6-82P-201ENST00000363970 107 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.453-201ENST00000384223 109 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 RNU6-43P-201ENST00000384302 107 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 RNA5SP489-201ENST00000410986 109 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 MTND3P21-201ENST00000433774 331 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AL161788.1-201ENST00000441805 169 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC055731.1-201ENST00000474387 401 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC092436.3-201ENST00000511788 257 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC011352.1-201ENST00000512300 793 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC109479.2-201ENST00000517842 174 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC146944.4-201ENST00000602697 718 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AP000907.4-201ENST00000604143 237 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AL670379.2-201ENST00000604983 252 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 snoU13.31-201ENST00000607291 104 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC090517.2-201ENST00000614966 680 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 FAM157A-202ENST00000615155 405 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AL159153.1-201ENST00000619688 317 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 AC007792.1-201ENST00000623023 402 ntBASIC1.63□□□□□ -2.15
NKX2-6A6NCS4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RNU6-944P-201ENST00000364023 107 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RNU6-534P-201ENST00000364877 106 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 MIR450B-201ENST00000401182 78 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RNA5SP270-201ENST00000411361 118 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 BTF3P4-201ENST00000418852 495 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RPL31P63-201ENST00000422565 375 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 HMGN2P19-201ENST00000425149 265 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AMD1P1-201ENST00000457220 922 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 HMGN2P26-201ENST00000463169 339 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RPS29P11-201ENST00000496507 171 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 MTCYBP18-201ENST00000501056 747 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AC008628.2-201ENST00000502605 298 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AC091885.1-201ENST00000506658 268 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 RNU6-965P-201ENST00000516721 96 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 ZNF519P2-201ENST00000557032 169 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AC090617.10-201ENST00000624308 134 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 MIR3688-2-201ENST00000636963 87 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 AC100810.6-201ENST00000638068 285 ntBASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NKX2-6A6NCS4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 Y_RNA.6-201ENST00000362350 114 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-254P-201ENST00000363377 107 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1210P-201ENST00000363775 107 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 SNORA36A-201ENST00000384221 132 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 RNU6-192P-201ENST00000391253 100 ntBASIC1.61□□□□□ -2.15
NKX2-6A6NCS4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms