Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 AC010329.5-201ENST00000623497 2174 ntBASIC3.42□□□□□ -1.86
SHISA3A0PJX4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SHISA3A0PJX4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 RNA5SP447-201ENST00000363749 119 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 SNORD50B-201ENST00000364995 70 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 Y_RNA.361-201ENST00000365515 120 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 AL357075.1-201ENST00000404107 726 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 RNU2-51P-201ENST00000410708 197 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 U8.19-201ENST00000459095 133 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 SRIP1-201ENST00000489235 288 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 RNU1-117P-201ENST00000517041 158 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 SNORA31.21-201ENST00000517180 77 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 AC079598.5-201ENST00000547460 117 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 MIR3684-201ENST00000579779 74 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 AC006111.3-201ENST00000622137 383 ntBASIC3.41□□□□□ -1.86
SHISA3A0PJX4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.41□□□□□ -1.86
SHISA3A0PJX4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHISA3A0PJX4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SHISA3A0PJX4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.4□□□□□ -1.86
SHISA3A0PJX4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHISA3A0PJX4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SHISA3A0PJX4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.215-201ENST00000364204 112 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.368-201ENST00000365547 113 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 SNORA72.4-201ENST00000384174 132 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 SNORA67.2-201ENST00000384300 149 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RNU6-959P-201ENST00000384671 107 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RNU6-239P-201ENST00000390990 99 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 SNORA26.5-201ENST00000391215 123 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AL355497.1-201ENST00000406262 551 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RPS29P17-201ENST00000430795 166 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RNU6-479P-201ENST00000516348 105 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RNU6-62P-201ENST00000516526 102 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 TVP23BP1-201ENST00000557500 617 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 MIR4738-201ENST00000579134 87 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 RNU1-30P-201ENST00000606575 163 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AP003122.5-201ENST00000527668 3766 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.4□□□□□ -1.87
SHISA3A0PJX4 AC000403.1-201ENST00000613696 3585 ntBASIC3.4□□□□□ -1.87
SHISA3A0PJX4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 MAPK10-372ENST00000641954 3413 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 RNU6-899P-201ENST00000363947 107 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.456-201ENST00000384232 111 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 RNU6-22P-201ENST00000384355 107 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 SNORA8.3-201ENST00000384679 139 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 RNU6-131P-201ENST00000391144 107 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AC092017.2-201ENST00000427600 362 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 CR769767.1-201ENST00000436337 346 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AL135790.2-201ENST00000437701 267 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AC146507.2-201ENST00000460608 476 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 SNORA70.12-201ENST00000516084 153 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 RNA5SP208-201ENST00000516156 78 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 PARP1P2-201ENST00000556806 195 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 MIR4431-201ENST00000579990 94 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 MIR5688-201ENST00000580619 83 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 MIR4744-201ENST00000581563 82 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 MIR6868-201ENST00000611215 58 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 Y_RNA.778-201ENST00000620203 90 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AC091895.1-201ENST00000624494 256 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AL136164.4-201ENST00000625013 2135 ntBASIC3.39□□□□□ -1.87
SHISA3A0PJX4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHISA3A0PJX4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.38□□□□□ -1.87
SHISA3A0PJX4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms