Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC073657.2-201ENST00000605661 303 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 AL162274.2-201ENST00000614406 332 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 AC018692.3-201ENST00000623929 123 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 U6.92-201ENST00000636464 89 ntBASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC163A0A0D9SF12 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-873P-201ENST00000363833 107 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 Y_RNA.574-201ENST00000384766 95 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-1109P-201ENST00000391187 107 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 RNU1-139P-201ENST00000391307 165 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 MTCYBP9-201ENST00000431021 303 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 RPS3P1-201ENST00000456781 192 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 AC109925.1-201ENST00000478069 331 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 RPS26P15-201ENST00000488067 348 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 AC092185.1-201ENST00000491371 97 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 MTCO2P24-201ENST00000515611 426 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 SCARNA11.3-201ENST00000517276 130 ntBASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC163A0A0D9SF12 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-280P-201ENST00000364145 104 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 SET-203ENST00000372688 801 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-281P-201ENST00000384212 103 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 Y_RNA.458-201ENST00000384240 102 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 RNY3P4-201ENST00000384428 101 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 FO393413.1-201ENST00000402892 195 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC103975.1-201ENST00000482506 483 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-897P-201ENST00000517135 105 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC023824.2-201ENST00000566185 400 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 MIR4659A-201ENST00000580269 81 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 MIR4503-201ENST00000582187 83 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC093732.2-201ENST00000607950 274 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 PCGEM1.1-201ENST00000613431 131 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 AC069528.2-201ENST00000624849 1991 ntBASIC3.42□□□□□ -1.86
CCDC163A0A0D9SF12 U3.9-201ENST00000363823 204 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-713P-201ENST00000384761 107 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 MIR627-201ENST00000384979 97 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 SNORD78.2-201ENST00000391076 69 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 SNORA12-201ENST00000391162 147 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AL512633.1-201ENST00000399931 655 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AL357075.1-201ENST00000404107 726 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 MIR320B2-201ENST00000408479 138 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 SNORD12B-201ENST00000410433 91 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-1328P-201ENST00000410938 106 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 RNU6-1001P-201ENST00000411265 100 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 ELOCP20-201ENST00000422460 345 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC027124.2-201ENST00000428249 105 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 RPEP5-201ENST00000441137 268 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC010095.1-201ENST00000443543 144 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC096638.1-201ENST00000444678 216 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 RNA5SP341-201ENST00000516261 117 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC034114.1-201ENST00000520293 285 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 TGIF1P1-201ENST00000558095 802 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AC027176.1-201ENST00000560204 514 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 PRR13P7-201ENST00000605538 430 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 AL121655.1-201ENST00000605811 308 ntBASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC163A0A0D9SF12 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC163A0A0D9SF12 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC163A0A0D9SF12 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC163A0A0D9SF12 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.86
CCDC163A0A0D9SF12 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.4□□□□□ -1.86
CCDC163A0A0D9SF12 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC163A0A0D9SF12 Y_RNA.19-201ENST00000362462 99 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.64-201ENST00000362845 102 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-137P-201ENST00000363680 108 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 SNORA80A-201ENST00000363922 136 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.214-201ENST00000364201 112 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 Y_RNA.439-201ENST00000384119 94 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 RNU6-318P-201ENST00000384283 103 ntBASIC3.4□□□□□ -1.87
CCDC163A0A0D9SF12 RNU2-20P-201ENST00000410425 191 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms