Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AC010332.2-201ENST00000613083 1904 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-799P-201ENST00000363567 107 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 SNORD74.4-201ENST00000364129 80 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-239P-201ENST00000390990 99 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 SNORA26.3-201ENST00000391119 136 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 MIR1183-201ENST00000408856 89 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 SNORD105B-201ENST00000458770 79 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 U8.19-201ENST00000459095 133 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 Y_RNA.637-201ENST00000459424 114 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 AC084357.1-201ENST00000473404 255 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 AC010409.1-201ENST00000487382 476 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 MIR432-201ENST00000606207 94 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 SNORD98-201ENST00000636377 67 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 MAPK10-303ENST00000641324 3959 ntBASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZC3H4Q9UPT8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
ZC3H4Q9UPT8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC027290.2-201ENST00000623210 18662 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 Y_RNA.261-201ENST00000364631 102 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 RNU4-11P-201ENST00000365287 132 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 SNORA18.3-201ENST00000384122 132 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 SNORA40-201ENST00000388090 126 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 SNORA48.2-201ENST00000390926 124 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC096649.2-201ENST00000416186 393 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 HMGN2P20-201ENST00000437531 273 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC069285.2-201ENST00000440210 275 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-928P-201ENST00000516876 104 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC100767.1-201ENST00000528178 123 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 NACAP3-201ENST00000552100 481 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC090616.3-201ENST00000582184 217 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC004944.1-201ENST00000517807 3059 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 AC022336.2-201ENST00000568966 2538 ntBASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZC3H4Q9UPT8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AC025445.1-201ENST00000502728 300 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP164-201ENST00000516533 110 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 RNU6-971P-201ENST00000516920 106 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 ACA59.2-201ENST00000517061 156 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 DEFB131C-201ENST00000528817 165 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AL359881.1-201ENST00000602916 267 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 MIR6852-201ENST00000621699 66 ntBASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZC3H4Q9UPT8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 Y_RNA.293-201ENST00000364908 93 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 SNORA20-201ENST00000384662 132 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 MIR513C-201ENST00000401352 84 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 MIR1289-1-201ENST00000408836 144 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 RNA5SP104-201ENST00000410989 118 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 CYCSP4-201ENST00000429682 331 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 HMGN2P10-201ENST00000448085 265 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 AC007215.1-201ENST00000464893 276 ntBASIC4.75□□□□□ -1.65
ZC3H4Q9UPT8 AC103975.1-201ENST00000482506 483 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms