Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SNORD32A-201ENST00000364805 84 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 RNA5SP212-201ENST00000391223 107 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL606923.1-201ENST00000406616 190 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL357139.1-201ENST00000407792 426 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 MTCO2P19-201ENST00000427513 598 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 SNAP23P1-201ENST00000433229 246 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 MTCO2P16-201ENST00000436962 677 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL121601.2-201ENST00000438019 707 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AC073415.1-201ENST00000449240 153 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 HMGN2P18-201ENST00000450680 270 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 RN7SKP210-201ENST00000459176 261 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 RNU7-180P-201ENST00000459240 63 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AC087884.1-201ENST00000469738 328 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AL163973.1-201ENST00000484753 577 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 COPS8P3-201ENST00000526024 482 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 BNIP3P25-201ENST00000596023 559 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AC012507.3-201ENST00000603556 477 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AC130454.1-201ENST00000622948 401 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 AC090582.1-201ENST00000636321 199 ntBASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
NPIPA1Q9UND3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.65□□□□□ -2.14
NPIPA1Q9UND3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
NPIPA1Q9UND3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 RNU6-23P-201ENST00000363283 107 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 RNU6-26P-201ENST00000383985 107 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 RNY3P9-201ENST00000384727 106 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 RNA5SP219-201ENST00000390940 113 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 RNU6-1158P-201ENST00000391167 107 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AL353193.1-201ENST00000421444 268 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 EIF4EP2-201ENST00000422816 654 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AC078809.1-201ENST00000427601 140 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 VN1R108P-201ENST00000431580 830 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 SNORD13-201ENST00000459299 104 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AC091874.1-201ENST00000511402 339 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 MIR3923-201ENST00000579521 83 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 MIR3941-201ENST00000582572 103 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 VN1R107P-201ENST00000601784 209 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AC016727.1-205ENST00000605437 569 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AP001596.2-201ENST00000608410 312 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 U1.36-201ENST00000620684 176 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 AP000560.1-201ENST00000624150 1937 ntBASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
NPIPA1Q9UND3 Y_RNA.77-201ENST00000362962 107 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 RNU6-234P-201ENST00000365229 104 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 RNU6-1103P-201ENST00000384150 107 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 SNORD73A-201ENST00000386062 65 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 SNORD37.1-201ENST00000390968 65 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 Y_RNA.595-201ENST00000410403 105 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AL606489.2-201ENST00000433886 234 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 GNAI2P1-201ENST00000541815 315 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AC023043.2-201ENST00000589678 1026 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AC078795.3-201ENST00000602913 472 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 RN7SKP299-201ENST00000606679 301 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 HULC.1-201ENST00000612720 240 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AL590240.4-201ENST00000616908 390 ntBASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
NPIPA1Q9UND3 RNA5SP493-201ENST00000364115 91 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 SNORD114-6-201ENST00000364393 72 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 RNU6-160P-201ENST00000384591 107 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 RN7SKP61-201ENST00000410642 295 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 CDK8P2-201ENST00000415020 547 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 AC132942.1-201ENST00000486753 483 ntBASIC1.63□□□□□ -2.15
NPIPA1Q9UND3 RPS29P11-201ENST00000496507 171 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms