Protein–RNA interactions for Protein: Q9UMW8

USP18, Ubl carboxyl-terminal hydrolase 18, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP18Q9UMW8 PTGES3P4-201ENST00000426243 356 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 RPL21P40-201ENST00000428586 483 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 RPL21P39-201ENST00000463605 483 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC087190.1-201ENST00000484462 480 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC107032.1-201ENST00000485945 480 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC132942.1-201ENST00000486753 483 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC093591.1-201ENST00000491435 481 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 RPL21P16-201ENST00000495531 483 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC016632.1-201ENST00000503994 196 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC091144.1-201ENST00000519573 138 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC034114.1-201ENST00000520293 285 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AP002770.2-201ENST00000543613 532 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USP18Q9UMW8 HSPE1P4-201ENST00000550617 308 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.36□□□□□ -1.87
USP18Q9UMW8 AL390123.1-201ENST00000603216 237 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 RAC1P9-201ENST00000604990 392 ntBASIC3.36□□□□□ -1.87
USP18Q9UMW8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.36□□□□□ -1.87
USP18Q9UMW8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USP18Q9UMW8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP18Q9UMW8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC010889.1-201ENST00000566193 2666 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNU6-505P-201ENST00000384427 107 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 Y_RNA.512-201ENST00000384518 102 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNU6-748P-201ENST00000384648 107 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 Y_RNA.556-201ENST00000384677 113 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNU6-19P-201ENST00000384718 107 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNU6-750P-201ENST00000390946 107 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 SNORA26.3-201ENST00000391119 136 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNU2-49P-201ENST00000410666 184 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC096649.2-201ENST00000416186 393 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 ELOCP20-201ENST00000422460 345 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 RPL39P29-201ENST00000447779 157 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 U8.22-201ENST00000459141 133 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 TOMM22P6-201ENST00000465035 409 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC087477.1-201ENST00000465747 340 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC109925.1-201ENST00000478069 331 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 SNORA25.11-201ENST00000515935 105 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNA5SP217-201ENST00000515959 91 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC090517.1-201ENST00000569307 266 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC090617.3-201ENST00000573670 475 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 MIR2682-201ENST00000580305 110 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 MIR4435-1-201ENST00000582552 80 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 RNU6-91P-201ENST00000607774 107 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP18Q9UMW8 Z75746.1-201ENST00000440243 2080 ntBASIC3.35□□□□□ -1.87
USP18Q9UMW8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.35□□□□□ -1.87
USP18Q9UMW8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP18Q9UMW8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.34□□□□□ -1.87
USP18Q9UMW8 RNU1-76P-201ENST00000362903 159 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 RNY3P4-201ENST00000384428 101 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 Y_RNA.504-201ENST00000384481 104 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 MT-TG-201ENST00000387429 68 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 AC244670.1-201ENST00000436879 112 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 DYNLT3P2-201ENST00000442517 295 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 AC012308.1-201ENST00000451232 178 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.34□□□□□ -1.87
USP18Q9UMW8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.34□□□□□ -1.87
USP18Q9UMW8 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.34□□□□□ -1.87
USP18Q9UMW8 AC007375.1-201ENST00000554513 578 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.34□□□□□ -1.87
USP18Q9UMW8 MIR4474-201ENST00000579189 78 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 uc_338.25-201ENST00000613756 156 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 MIR8062-201ENST00000621515 85 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 AC018692.3-201ENST00000623929 123 ntBASIC3.34□□□□□ -1.87
USP18Q9UMW8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP18Q9UMW8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP18Q9UMW8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
USP18Q9UMW8 AC092268.1-201ENST00000342691 405 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RNU6-805P-201ENST00000365643 106 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 U8.10-201ENST00000384260 133 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RNU6-611P-201ENST00000384276 104 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 MIR32-201ENST00000384965 70 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 MIR153-2-201ENST00000385225 87 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RNA5SP213-201ENST00000391031 106 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.33□□□□□ -1.88
USP18Q9UMW8 AC004383.1-201ENST00000438135 289 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RPEP5-201ENST00000441137 268 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RNU7-87P-201ENST00000459343 62 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.33□□□□□ -1.88
USP18Q9UMW8 Y_RNA.668-201ENST00000516233 93 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 RNU6-897P-201ENST00000517135 105 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.33□□□□□ -1.88
USP18Q9UMW8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.33□□□□□ -1.88
USP18Q9UMW8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.33□□□□□ -1.88
USP18Q9UMW8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.33□□□□□ -1.88
USP18Q9UMW8 AL391813.1-201ENST00000603098 260 ntBASIC3.33□□□□□ -1.88
USP18Q9UMW8 AL121655.1-201ENST00000605811 308 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms