Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 AC103810.6-201ENST00000606708 136 ntBASIC2.28□□□□□ -2.04
CPSF2Q9P2I0 MIR1248-201ENST00000629190 106 ntBASIC2.28□□□□□ -2.04
CPSF2Q9P2I0 AC073869.6-201ENST00000640656 341 ntBASIC2.28□□□□□ -2.04
CPSF2Q9P2I0 AC016717.2-201ENST00000609089 5141 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 RNA5SP276-201ENST00000362580 94 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 Y_RNA.100-201ENST00000363141 102 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 RNU6-743P-201ENST00000364151 106 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 Y_RNA.453-201ENST00000384223 109 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 MIR1262-201ENST00000408276 93 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AL030996.1-201ENST00000411430 235 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 VN1R36P-201ENST00000414936 291 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 USP9YP28-201ENST00000435142 589 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC007547.1-201ENST00000462177 490 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 MTCO1P29-201ENST00000496868 288 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 TRBVA-201ENST00000498804 316 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 ANXA2P1-201ENST00000505539 926 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC011352.1-201ENST00000512300 793 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 RNU6-718P-201ENST00000516166 105 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 MIR3923-201ENST00000579521 83 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC068790.6-201ENST00000602558 258 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC091932.3-201ENST00000624223 323 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AP006437.1-201ENST00000641440 3685 ntBASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.27□□□□□ -2.05
CPSF2Q9P2I0 Y_RNA.414-201ENST00000384011 101 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 MIR1294-201ENST00000408503 142 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 AC104564.1-201ENST00000493028 407 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 AC021146.2-201ENST00000504736 556 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 MIR449C-201ENST00000516047 92 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 CPDP1-201ENST00000579660 283 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 AL627230.6-201ENST00000611129 280 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 MIR3662-201ENST00000637030 95 ntBASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CPSF2Q9P2I0 EIF1AXP1-201ENST00000419267 435 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AL513185.2-201ENST00000425543 193 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 MTND1P4-201ENST00000435196 415 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 RNU7-187P-201ENST00000458985 68 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC092989.1-201ENST00000481235 277 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC096745.1-201ENST00000509945 370 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 RNA5SP24-201ENST00000516478 95 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 RNU6-567P-201ENST00000516746 107 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 RNU6-256P-201ENST00000516747 97 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 CYP4A27P-201ENST00000567218 190 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC146944.4-201ENST00000602697 718 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC006023.1-201ENST00000603944 259 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AL138726.1-201ENST00000614873 333 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 AC098679.4-201ENST00000624241 654 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CPSF2Q9P2I0 ZNF702P-202ENST00000434269 1966 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 Y_RNA.135-201ENST00000363439 95 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 SNORD14D-201ENST00000384390 87 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 MIR518A2-201ENST00000384966 87 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 RNU6-192P-201ENST00000391253 100 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 RNA5SP118-201ENST00000410385 109 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 SRIP3-201ENST00000413200 219 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 ZNF885P-201ENST00000420174 1098 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AC018634.1-201ENST00000437554 401 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AC114801.2-201ENST00000503825 781 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 PTP4A1P4-201ENST00000512479 322 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 RNU6-991P-201ENST00000516168 107 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AC016256.1-201ENST00000547971 354 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AP000654.2-201ENST00000605633 586 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AL133215.3-201ENST00000609801 448 ntBASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.24□□□□□ -2.05
CPSF2Q9P2I0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms