Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LRFN1Q9P244 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.76□□□□□ -1.97
LRFN1Q9P244 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC233981.2-201ENST00000611524 1614 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LRFN1Q9P244 Y_RNA.394-201ENST00000383942 103 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 Y_RNA.431-201ENST00000384086 102 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 RPL21P3-201ENST00000395517 478 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 RNU6-1050P-201ENST00000410388 107 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC012306.1-201ENST00000423267 114 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC007677.1-201ENST00000445757 515 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC021146.2-201ENST00000504736 556 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC005741.1-201ENST00000511094 432 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.76□□□□□ -1.97
LRFN1Q9P244 CBX3P7-201ENST00000532876 502 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 MRPS36P4-201ENST00000534436 298 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 MIR5690-201ENST00000583739 73 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AP000654.2-201ENST00000605633 586 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC084781.2-201ENST00000615568 161 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 HMGB1P24-202ENST00000615653 685 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 AC126177.8-201ENST00000618339 1015 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 MTND5P9-201ENST00000503854 1755 ntBASIC2.76□□□□□ -1.97
LRFN1Q9P244 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.76□□□□□ -1.97
LRFN1Q9P244 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LRFN1Q9P244 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LRFN1Q9P244 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 MIR449A-201ENST00000362113 91 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 RNA5SP126-201ENST00000365092 109 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 SNORA26.7-201ENST00000391288 122 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 RNU6-370P-201ENST00000411008 104 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 RPS26P42-201ENST00000413485 326 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 MTCO2P27-201ENST00000420740 428 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AF228730.4-201ENST00000421457 183 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AL590556.1-201ENST00000423231 483 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC145146.1-201ENST00000496370 254 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC083906.5-201ENST00000503722 328 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 Y_RNA.670-201ENST00000516255 105 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC107016.2-201ENST00000547968 190 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC023043.3-201ENST00000593113 385 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AL355297.2-201ENST00000604792 129 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 RPL23AP88-201ENST00000605759 454 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AL627309.6-201ENST00000606857 840 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 SCARNA4-201ENST00000629045 128 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 AC099654.10-201ENST00000640395 161 ntBASIC2.75□□□□□ -1.97
LRFN1Q9P244 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LRFN1Q9P244 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.75□□□□□ -1.97
LRFN1Q9P244 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 KPNA2P1-201ENST00000458289 1591 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 Y_RNA.2-201ENST00000362330 96 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 SNORA46.1-201ENST00000391069 153 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 RNY4P36-201ENST00000391116 96 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 RN7SKP284-201ENST00000411002 343 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 BMS1P22-201ENST00000414726 313 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 AC112220.1-201ENST00000434628 355 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 AF186996.7-201ENST00000492781 209 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 RNU1-143P-201ENST00000516296 146 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 RNU6-307P-201ENST00000516743 106 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 U1.23-201ENST00000610293 146 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 RNU1-68P-201ENST00000615382 146 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 U1.39-201ENST00000621562 146 ntBASIC2.74□□□□□ -1.97
LRFN1Q9P244 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRFN1Q9P244 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
LRFN1Q9P244 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.73□□□□□ -1.97
LRFN1Q9P244 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
LRFN1Q9P244 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.73□□□□□ -1.97
LRFN1Q9P244 RNU6-1188P-201ENST00000363795 107 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 RNU6-944P-201ENST00000364023 107 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 U8.9-201ENST00000365667 134 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 XGY1-201ENST00000381172 446 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 RNU6-851P-201ENST00000384565 107 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 Y_RNA.579-201ENST00000390939 94 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 SNORA75.4-201ENST00000391278 119 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LRFN1Q9P244 RNA5SP274-201ENST00000410484 108 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 RN7SKP58-201ENST00000411010 305 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 AC243428.1-201ENST00000421099 264 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 AL358453.1-201ENST00000422522 250 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 CBX3P6-201ENST00000430257 527 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 FO393415.2-201ENST00000480085 343 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 RN7SL20P-201ENST00000488827 297 ntBASIC2.73□□□□□ -1.97
LRFN1Q9P244 RPL23AP75-201ENST00000491601 451 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms