Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-72P-201ENST00000384285 79 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.510-201ENST00000384511 114 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 SNORA40-201ENST00000388090 126 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 RNA5SP213-201ENST00000391031 106 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 SNORA48.5-201ENST00000391143 135 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 MIR1289-1-201ENST00000408836 144 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC024067.1-201ENST00000426199 223 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 WARS2P1-201ENST00000429678 537 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC124916.1-201ENST00000444020 547 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC009237.7-201ENST00000447357 229 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 RPL23AP49-201ENST00000492925 468 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 RNU2-27P-201ENST00000516185 142 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AK6P2-201ENST00000549020 471 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC009127.3-201ENST00000570531 403 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 MIR5695-201ENST00000579717 85 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 MIR3124-201ENST00000582636 67 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 Y_RNA.778-201ENST00000620203 90 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC006001.4-201ENST00000622243 395 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 MIR410-201ENST00000362222 80 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 SNORD9-201ENST00000362566 104 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 RNU4-84P-201ENST00000364200 139 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 RNU6-429P-201ENST00000384582 108 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 MIR153-2-201ENST00000385225 87 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 RNU2-68P-201ENST00000410878 191 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AC117440.1-201ENST00000474107 571 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 UBE2DNL-203ENST00000474922 222 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 RPL26P26-201ENST00000480251 434 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AF186996.7-201ENST00000492781 209 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AC091874.1-201ENST00000511402 339 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 RNU6-1114P-201ENST00000516022 107 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 MED28P6-201ENST00000558776 231 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 UBL5P4-201ENST00000562584 236 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 MIR4423-201ENST00000580922 80 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 KLKP1-201ENST00000595979 403 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 AC073349.3-201ENST00000617616 186 ntBASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMCD1Q9NZU5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 MAPK10-373ENST00000641983 6772 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 AC091152.2-201ENST00000591628 2569 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 RNU6-961P-201ENST00000363893 105 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 RNU6-1175P-201ENST00000365200 107 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 RNU6-1181P-201ENST00000384191 106 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 AL357075.1-201ENST00000404107 726 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 RPL27AP8-201ENST00000424277 446 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 RNU6-567P-201ENST00000516746 107 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 MIR4782-201ENST00000577987 79 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 AC008873.1-201ENST00000625051 138 ntBASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LMCD1Q9NZU5 AC004944.1-201ENST00000517807 3059 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AC008568.2-201ENST00000623862 2313 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 RNU6-755P-201ENST00000364400 103 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 RNU6-80P-201ENST00000384195 107 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 MIR487A-201ENST00000385009 80 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 RNU1-139P-201ENST00000391307 165 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 RNU6-1001P-201ENST00000411265 100 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AC005300.1-201ENST00000428401 373 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 POLR2KP2-201ENST00000438155 177 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AC096638.1-201ENST00000444678 216 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 AC007395.1-201ENST00000451333 677 ntBASIC3.93□□□□□ -1.78
LMCD1Q9NZU5 RN7SKP49-201ENST00000516675 260 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms