Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 AC002546.1-201ENST00000588041 2504 ntBASIC3.16□□□□□ -1.9
PARPBPQ9NWS1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PARPBPQ9NWS1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PARPBPQ9NWS1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PARPBPQ9NWS1 AC093010.3-201ENST00000570269 15214 ntBASIC3.15□□□□□ -1.9
PARPBPQ9NWS1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 SNORA25.1-201ENST00000362326 128 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RNA5SP124-201ENST00000362739 110 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RNU6-1289P-201ENST00000384431 106 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 MIR449B-201ENST00000384995 97 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RN7SKP27-201ENST00000410684 333 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RPS29P4-201ENST00000414733 161 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC138623.1-201ENST00000418060 216 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 GOT2P5-201ENST00000433995 546 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC117440.1-201ENST00000474107 571 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 MRPL42P6-201ENST00000486397 371 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RPL21P129-201ENST00000491732 478 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC110768.1-201ENST00000509222 400 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 RNU6-581P-201ENST00000516214 105 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 SNORA67.7-201ENST00000516664 135 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 HSPE1P4-201ENST00000550617 308 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC008739.3-201ENST00000603262 127 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC012468.1-201ENST00000604888 430 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 MIR6134-201ENST00000617606 109 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC024581.2-201ENST00000619986 252 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AF117829.1-206ENST00000621883 3802 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 AC007496.3-201ENST00000624987 3443 ntBASIC3.15□□□□□ -1.91
PARPBPQ9NWS1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.8-201ENST00000362353 102 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 RNA5SP42-201ENST00000364278 115 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.291-201ENST00000364886 113 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 U3.19-201ENST00000390893 196 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 RNU6-1245P-201ENST00000411130 106 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AC010095.1-201ENST00000443543 144 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.638-201ENST00000459374 113 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 COX6CP14-201ENST00000469580 174 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AC006483.1-201ENST00000487308 313 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 SNORA40.9-201ENST00000515895 93 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 SNORA31.23-201ENST00000517219 133 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 MIR5571-201ENST00000577998 113 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AC072026.1-201ENST00000605023 201 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 U3.45-201ENST00000607547 219 ntBASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
PARPBPQ9NWS1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 AC007656.2-201ENST00000624902 4547 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 SRP72P2-201ENST00000344851 1979 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 MIR410-201ENST00000362222 80 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.82-201ENST00000363000 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.92-201ENST00000363043 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.235-201ENST00000364412 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 RNU6-283P-201ENST00000364788 107 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.306-201ENST00000365015 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.312-201ENST00000365089 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.322-201ENST00000365151 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 SNORD113-1-201ENST00000365321 69 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 SNORA48.7-201ENST00000391302 135 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 HMGN2P30-201ENST00000423237 256 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 GPM6BP3-201ENST00000442797 145 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 TMSB4XP3-201ENST00000445144 114 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.650-201ENST00000459002 102 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 RPS29P26-201ENST00000477483 171 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 RPL30P5-201ENST00000494923 336 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 RPS27AP10-201ENST00000496103 208 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 Y_RNA.662-201ENST00000516028 97 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 RNU7-200P-201ENST00000516105 62 ntBASIC3.13□□□□□ -1.91
PARPBPQ9NWS1 SNORA27.4-201ENST00000516650 95 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms