Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AC006971.1-201ENST00000407916 4486 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 RNU1-63P-201ENST00000383902 164 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 SNORA20B-201ENST00000384220 132 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 PTMAP5-201ENST00000393073 333 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 SDHCP2-201ENST00000398565 501 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 SNORA84-201ENST00000459229 133 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 RPS27AP10-201ENST00000496103 208 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 RNU6-1061P-201ENST00000516530 99 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 CYP4A27P-201ENST00000567218 190 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 ZYXP1-201ENST00000617638 118 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AL121890.5-201ENST00000620848 304 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AC140113.4-201ENST00000622087 222 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AC106754.2-201ENST00000623006 233 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 MIR3199-2-201ENST00000636243 86 ntBASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CUEDC1Q9NWM3 AC125257.1-201ENST00000560400 2930 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AC138915.1-201ENST00000565427 1685 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 MIR450A1-201ENST00000362262 91 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 MIR195-201ENST00000385194 87 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 RNU1-101P-201ENST00000391171 127 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 Y_RNA.630-201ENST00000411370 108 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AC012671.1-201ENST00000451912 203 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AC010469.1-201ENST00000463864 576 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 RNU6-107P-201ENST00000516643 102 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AC034105.4-201ENST00000568304 277 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 HMGN2P15-201ENST00000585707 270 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AC015813.4-201ENST00000610469 179 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 MIR8058-201ENST00000615737 89 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 XIST_intron.1-201ENST00000619444 68 ntBASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CUEDC1Q9NWM3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 AC091152.2-201ENST00000591628 2569 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 Y_RNA.114-201ENST00000363265 113 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 SNORD58C-201ENST00000365223 64 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 RPS26P8-201ENST00000393490 348 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 SNORA79-201ENST00000408376 140 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 RNA5SP390-201ENST00000410191 113 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 snoU13.22-201ENST00000459428 104 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 RPL31P41-201ENST00000477967 372 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 AC006517.1-201ENST00000480485 328 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 MIR4429-201ENST00000580105 73 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 MIR378D2-201ENST00000580636 98 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 AC120024.3-201ENST00000603167 156 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 AC091905.2-201ENST00000623143 306 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 MIR3529-201ENST00000637713 78 ntBASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CUEDC1Q9NWM3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 Y_RNA.361-201ENST00000365515 120 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 Y_RNA.415-201ENST00000384012 112 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 SNORA26.2-201ENST00000390922 122 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 FTH1P15-201ENST00000406984 280 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 RN7SKP167-201ENST00000411047 285 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 AC019205.3-201ENST00000424573 156 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 AC006028.1-201ENST00000438379 402 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 RNU7-23P-201ENST00000459465 62 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 RN7SL303P-201ENST00000469773 251 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 SNORD59.2-201ENST00000516873 68 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 AP005019.3-201ENST00000620418 560 ntBASIC4.3□□□□□ -1.72
CUEDC1Q9NWM3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms