Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC092436.3-201ENST00000511788 257 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 AC008413.1-201ENST00000511864 177 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.655-201ENST00000515919 96 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 MTND1P35-201ENST00000526739 508 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 AC109446.1-201ENST00000566172 220 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 MIR5694-201ENST00000581190 76 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 MIR1248-201ENST00000629190 106 ntBASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
BLOC1S4Q9NUP1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-254P-201ENST00000363377 107 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AL023284.1-201ENST00000403956 276 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AL512604.1-201ENST00000404812 257 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 MIR1262-201ENST00000408276 93 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 RNA5SP118-201ENST00000410385 109 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 ZNF885P-201ENST00000420174 1098 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AL645568.3-201ENST00000433683 316 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 MTND2P29-201ENST00000438595 412 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AC091874.1-201ENST00000511402 339 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 TPRKBP2-201ENST00000565969 475 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AL078605.1-201ENST00000603529 500 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA43.4-201ENST00000629559 138 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 AL450472.1-202ENST00000637286 180 ntBASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.38□□□□□ -2.03
BLOC1S4Q9NUP1 MIRLET7G-201ENST00000362280 84 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 AL030996.1-201ENST00000411430 235 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 MTND3P9-201ENST00000429526 346 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 AL356320.1-201ENST00000429616 163 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 AMD1P1-201ENST00000457220 922 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 RPS29P27-201ENST00000463711 170 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 RNA5SP490-201ENST00000517141 136 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 MIR4287-201ENST00000579398 78 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 FAM157A-202ENST00000615155 405 ntBASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.37□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-877P-201ENST00000383868 107 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.450-201ENST00000384198 113 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-1215P-201ENST00000384441 102 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-160P-201ENST00000384591 107 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA80E-201ENST00000384744 137 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA12-201ENST00000391162 147 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 MIR208B-201ENST00000401172 77 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 RN7SKP223-201ENST00000410582 62 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC009161.1-201ENST00000417306 376 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AL589823.1-201ENST00000429577 183 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 RNA5SP233-201ENST00000459153 113 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC007547.1-201ENST00000462177 490 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC091435.1-201ENST00000505442 584 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC096745.1-201ENST00000509945 370 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 RPL39P5-202ENST00000512505 151 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 CYP2C61P-201ENST00000604072 290 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC005034.5-201ENST00000604219 466 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 MIR8076-201ENST00000611401 83 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC064859.1-201ENST00000624741 174 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
BLOC1S4Q9NUP1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 RNU1-58P-201ENST00000362413 163 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 SNORA64-201ENST00000384674 134 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 RNU6-325P-201ENST00000411132 105 ntBASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.35□□□□□ -2.03
BLOC1S4Q9NUP1 AC021146.2-201ENST00000504736 556 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 722.4 ms