Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SNORA29-201ENST00000384183 140 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AL033519.2-201ENST00000403958 392 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC005002.2-201ENST00000438228 269 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC109925.1-201ENST00000478069 331 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC021205.2-201ENST00000480069 347 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 RNU6-1114P-201ENST00000516022 107 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 RNU6-711P-201ENST00000517255 106 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC024581.2-201ENST00000619986 252 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC073308.1-201ENST00000623696 305 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AL137790.1-201ENST00000634283 177 ntBASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PDLIM7Q9NR12 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 ZNF826P-207ENST00000622273 1910 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 AL157777.2-201ENST00000258070 137 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 SNORD56.1-201ENST00000362913 68 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.76-201ENST00000362931 109 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 RNU6-884P-201ENST00000363889 107 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 Y_RNA.286-201ENST00000364813 102 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 RNA5SP213-201ENST00000391031 106 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 RNU1-139P-201ENST00000391307 165 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 PCNPP3-201ENST00000393579 471 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 SNORD12B-201ENST00000410433 91 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 RNA5SP38-201ENST00000410750 119 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 HMGN2P30-201ENST00000423237 256 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 RPL23AP82-202ENST00000427528 469 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 SRP72P2-201ENST00000344851 1979 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 TNPO1P3-201ENST00000436471 2662 ntBASIC3.72□□□□□ -1.81
PDLIM7Q9NR12 AL355596.1-201ENST00000565399 3996 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 RNU1-100P-201ENST00000365255 165 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 RNU6-541P-201ENST00000384709 110 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 RNU4-30P-201ENST00000410245 143 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 RPL26P27-201ENST00000414397 437 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 RPL37P4-201ENST00000448908 268 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 SNRPGP7-201ENST00000469016 106 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 SNORD59.2-201ENST00000516873 68 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 MIR2276-201ENST00000516886 89 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 AL162713.1-201ENST00000604480 262 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 HSPE1P7-201ENST00000604681 321 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 AC005296.1-201ENST00000616145 209 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 AC127459.3-201ENST00000624328 466 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 SNORA43.4-201ENST00000629559 138 ntBASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PDLIM7Q9NR12 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 Y_RNA.44-201ENST00000362676 108 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 SNORA53-201ENST00000391141 249 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 AC125238.1-201ENST00000448842 249 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 HMGB3P8-201ENST00000449709 577 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 SEPT14P8-201ENST00000508026 178 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 AC024405.2-202ENST00000532731 184 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 CBX3P4-201ENST00000538909 354 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 SNORD113-5-201ENST00000607261 78 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 MIR6134-201ENST00000617606 109 ntBASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.7□□□□□ -1.82
PDLIM7Q9NR12 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 HAUS6P2-201ENST00000433254 2404 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 MIR449A-201ENST00000362113 91 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 MIR411-201ENST00000362239 96 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 RNU5B-2P-201ENST00000363036 113 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 RNU6-142P-201ENST00000384019 107 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 Y_RNA.504-201ENST00000384481 104 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 MIR487A-201ENST00000385009 80 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 AC074117.2-201ENST00000417130 397 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 RPL23AP95-201ENST00000426806 265 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 WARS2P1-201ENST00000429678 537 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 AC007969.2-201ENST00000441891 191 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 AC096638.1-201ENST00000444678 216 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 AL392103.1-201ENST00000447000 198 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 NDUFB4P10-201ENST00000452541 359 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 AC107393.1-201ENST00000512403 346 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 AC027288.2-201ENST00000553028 243 ntBASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.69□□□□□ -1.82
PDLIM7Q9NR12 UBL5P4-201ENST00000562584 236 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms