Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-1140P-201ENST00000410517 106 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPL19P1-201ENST00000411635 428 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 USMG5P1-201ENST00000425964 177 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AL031659.1-201ENST00000447075 539 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPL30P15-201ENST00000457129 321 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AP001324.2-201ENST00000461163 319 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPL21P39-201ENST00000463605 483 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AC093591.1-201ENST00000491435 481 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPL21P16-201ENST00000495531 483 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AC005741.1-201ENST00000511094 432 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 SNORA31.6-201ENST00000516241 130 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 AC008739.2-201ENST00000597006 317 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 uc_338.14-201ENST00000613162 166 ntBASIC2.32□□□□□ -2.04
SIX2Q9NPC8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SIX2Q9NPC8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.2-201ENST00000362330 96 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.394-201ENST00000383942 103 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 RNU6-43P-201ENST00000384302 107 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 MIR544A-201ENST00000384855 91 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.579-201ENST00000390939 94 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 SNORA48.3-201ENST00000391081 134 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 BTF3L4P2-201ENST00000392798 346 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 RPL23AP95-201ENST00000426806 265 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 MTND1P14-201ENST00000427400 950 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 RPS29P12-201ENST00000460178 152 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 RPL31P41-201ENST00000477967 372 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC097473.1-201ENST00000508142 408 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 SMURF2P1-201ENST00000514992 481 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 SCARNA17.1-201ENST00000516211 143 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 SCARNA17.2-201ENST00000516334 143 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 RNA5SP384-201ENST00000516615 116 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 SCARNA17.4-201ENST00000614296 143 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC133104.2-201ENST00000615272 193 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC099654.7-201ENST00000635788 2127 ntBASIC2.31□□□□□ -2.04
SIX2Q9NPC8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SIX2Q9NPC8 AC009487.4-201ENST00000624969 3585 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 SNORD50.1-201ENST00000362987 71 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.123-201ENST00000363338 102 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.187-201ENST00000363918 113 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 RNU6-784P-201ENST00000384330 106 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 RNU6-1222P-201ENST00000384615 107 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 RNU6-331P-201ENST00000384724 107 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 EIF4EP2-201ENST00000422816 654 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 BX276092.3-201ENST00000424182 230 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 RPL30P12-201ENST00000474666 353 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AC091874.1-201ENST00000511402 339 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 SCARNA16.2-201ENST00000516520 172 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AC093249.1-201ENST00000567049 203 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 MIR4719-201ENST00000585233 84 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AC044792.1-201ENST00000593294 196 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 RPL23AP78-201ENST00000599928 470 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AL356157.2-201ENST00000605122 111 ntBASIC2.3□□□□□ -2.04
SIX2Q9NPC8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.3□□□□□ -2.04
SIX2Q9NPC8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AL109809.4-201ENST00000603520 2185 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AC002543.1-201ENST00000299783 1954 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 RNU6-1010P-201ENST00000362757 107 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 Y_RNA.146-201ENST00000363549 102 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 RNU6-890P-201ENST00000384121 107 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 SNORA75.6-201ENST00000391318 127 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 RNU2-23P-201ENST00000410545 195 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.29□□□□□ -2.04
SIX2Q9NPC8 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
SIX2Q9NPC8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms