Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU2-69P-201ENST00000516061 100 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 SUB1P3-201ENST00000564581 315 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 Z69720.2-201ENST00000624755 279 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 MTND4P23-201ENST00000447723 1363 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 MIR337-201ENST00000362281 93 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 RNU6-527P-201ENST00000363425 104 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 SNORD116-1-201ENST00000384335 95 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 RNU6-393P-201ENST00000384475 107 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 RNU6-903P-201ENST00000391270 109 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 RNU4-46P-201ENST00000410818 138 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 CDK8P2-201ENST00000415020 547 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 PRPS1P1-201ENST00000445305 876 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AL035666.1-201ENST00000446195 348 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 SNRPGP7-201ENST00000469016 106 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC005840.1-201ENST00000498412 377 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 MTND2P38-201ENST00000522536 667 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 TRAV32-201ENST00000553993 340 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 DNAJC19P9-201ENST00000555084 351 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AGGF1P4-201ENST00000568249 801 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 MIR3611-201ENST00000584484 83 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC010928.2-201ENST00000588017 287 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC068790.2-201ENST00000602601 557 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AL136363.2-201ENST00000604173 851 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AP000654.2-201ENST00000605633 586 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 AC063943.3-201ENST00000615562 356 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
TM9SF3Q9HD45 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 RNU6-552P-201ENST00000362869 119 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 Y_RNA.409-201ENST00000383990 98 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 MIR544A-201ENST00000384855 91 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 MTCO2P19-201ENST00000427513 598 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC007969.2-201ENST00000441891 191 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 RPL39P29-201ENST00000447779 157 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 RNU7-95P-201ENST00000459222 64 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC104136.1-201ENST00000512969 394 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC022880.1-201ENST00000534017 973 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC109347.2-201ENST00000610220 349 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AL159153.1-201ENST00000619688 317 ntBASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
TM9SF3Q9HD45 AC006026.1-201ENST00000444025 1803 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORD116-9-201ENST00000384000 95 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORD116-2-201ENST00000384274 95 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORD116-3-201ENST00000384287 95 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORD116-7-201ENST00000384404 95 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORD116-5-201ENST00000384462 95 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORD116-6-201ENST00000384711 96 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1158P-201ENST00000391167 107 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AL357139.1-201ENST00000407792 426 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AL591043.1-201ENST00000432461 424 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 RPS3AP17-201ENST00000472594 777 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC079382.1-201ENST00000493346 557 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 RNU6-1038P-201ENST00000516516 104 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 SNORA25.17-201ENST00000517184 124 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC091135.1-201ENST00000585943 307 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC007684.1-201ENST00000609671 477 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 AC022418.1-201ENST00000624118 445 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 U4.7-201ENST00000638126 106 ntBASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.64□□□□□ -2.15
TM9SF3Q9HD45 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 Y_RNA.51-201ENST00000362725 102 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RNY1P10-201ENST00000363268 113 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 RNU6-105P-201ENST00000363909 104 ntBASIC1.63□□□□□ -2.15
TM9SF3Q9HD45 Y_RNA.296-201ENST00000364930 108 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms