Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.650-201ENST00000459002 102 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 RNU6-1198P-201ENST00000516904 67 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.777-201ENST00000516982 102 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 H3F3AP1-201ENST00000559984 334 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.771-201ENST00000598668 102 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 AL162424.1-201ENST00000602325 221 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 AC072026.1-201ENST00000605023 201 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 AL033523.1-201ENST00000605153 153 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 RMST_8.1-201ENST00000610287 165 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.789-201ENST00000622480 102 ntBASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
BCAS3Q9H6U6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RNU6-879P-201ENST00000364328 108 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.275-201ENST00000364726 110 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RNU1-100P-201ENST00000365255 165 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RNU6-898P-201ENST00000365627 104 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RNU6-1145P-201ENST00000384246 107 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.570-201ENST00000384750 101 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RNU6-1140P-201ENST00000410517 106 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RN7SKP61-201ENST00000410642 295 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RHEBP3-201ENST00000411920 351 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC074117.2-201ENST00000417130 397 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AL512844.2-201ENST00000433990 593 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 RPL37P4-201ENST00000448908 268 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 NDUFB4P10-201ENST00000452541 359 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC109925.1-201ENST00000478069 331 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC091874.1-201ENST00000511402 339 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC107393.1-201ENST00000512403 346 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC008885.1-201ENST00000514930 301 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC107934.2-201ENST00000518653 310 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.61□□□□□ -1.83
BCAS3Q9H6U6 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.286-201ENST00000364813 102 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 RNU6-125P-201ENST00000384505 107 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 MIR329-1-201ENST00000385028 80 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 MIR548I2-201ENST00000408348 149 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 NDUFS5P4-201ENST00000412983 318 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 RPS26P42-201ENST00000413485 326 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 HMGN2P30-201ENST00000423237 256 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AC010401.1-201ENST00000463867 348 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 RPL7P47-201ENST00000497299 556 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AC005921.1-201ENST00000510589 286 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 LARP7P3-201ENST00000579888 337 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AL137843.1-201ENST00000605078 385 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AC037487.3-201ENST00000606668 112 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 AL162274.2-201ENST00000614406 332 ntBASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
BCAS3Q9H6U6 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 AL365361.1-201ENST00000566942 3481 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 SNORA31-201ENST00000362607 130 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 RNU6-774P-201ENST00000363238 107 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 RNU6-740P-201ENST00000364734 105 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.319-201ENST00000365138 92 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 RNY1P5-201ENST00000383890 115 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 SNORA54-201ENST00000384281 123 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 RNU6-658P-201ENST00000384606 106 ntBASIC3.59□□□□□ -1.83
BCAS3Q9H6U6 Y_RNA.569-201ENST00000384749 103 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms