Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 Y_RNA.409-201ENST00000383990 98 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 POLHP1-201ENST00000411806 470 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC073415.1-201ENST00000449240 153 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC013470.1-201ENST00000453438 462 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 RNU7-167P-201ENST00000459160 62 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC108078.1-201ENST00000508073 725 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC008834.1-201ENST00000511612 175 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 RNU6-1038P-201ENST00000516516 104 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 MTND2P38-201ENST00000522536 667 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC022616.8-201ENST00000533569 253 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AC018630.3-201ENST00000542637 96 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 MIR3611-201ENST00000584484 83 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 AL645939.4-201ENST00000604495 135 ntBASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RPAP3Q9H6T3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 BX510359.4-201ENST00000423750 193 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AL606489.2-201ENST00000433886 234 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 IFNA20P-201ENST00000436840 528 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 HSPE1P21-201ENST00000438283 308 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 MTND2P29-201ENST00000438595 412 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 RNU7-180P-201ENST00000459240 63 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 HMGB1P29-201ENST00000505659 499 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AK3P2-201ENST00000507976 429 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AP005660.1-201ENST00000522972 293 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 MIR4713-201ENST00000582691 75 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 BNIP3P16-201ENST00000589779 534 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AL359821.1-201ENST00000605519 182 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 MIR1248-201ENST00000629190 106 ntBASIC1.89□□□□□ -2.11
RPAP3Q9H6T3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 RNU6-43P-201ENST00000384302 107 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 SNORD116-1-201ENST00000384335 95 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 Y_RNA.582-201ENST00000391023 95 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 MIR934-201ENST00000401241 83 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AL117339.3-201ENST00000418733 162 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AL121601.2-201ENST00000438019 707 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AL163540.1-201ENST00000485382 386 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 CCDC34P1-201ENST00000507441 517 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC079140.5-201ENST00000507882 310 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC091133.4-201ENST00000511142 308 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 COPS8P3-201ENST00000526024 482 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC115990.1-201ENST00000526957 301 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 SUB1P3-201ENST00000564581 315 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 MIR4285-201ENST00000581001 85 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC103987.3-201ENST00000582071 292 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC004223.2-201ENST00000590309 544 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 RNU6-85P-201ENST00000605989 107 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 U2.17-201ENST00000611454 95 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RPAP3Q9H6T3 RNU1-42P-201ENST00000364033 160 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 RNU6-1119P-201ENST00000384349 108 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 SNORD73A-201ENST00000386062 65 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 RPS29P13-201ENST00000402041 169 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 RPS20P15-201ENST00000412792 311 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AC010975.2-201ENST00000427781 588 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AL163973.1-201ENST00000484753 577 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AC005840.1-201ENST00000498412 377 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 RPL39P5-202ENST00000512505 151 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 MTND3P5-201ENST00000512798 333 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 SNORA31.16-201ENST00000516773 139 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 MIR3941-201ENST00000582572 103 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AC012507.3-201ENST00000603556 477 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AC018889.1-201ENST00000605372 397 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
RPAP3Q9H6T3 RNU4-15P-201ENST00000362613 141 ntBASIC1.86□□□□□ -2.11
RPAP3Q9H6T3 SNORD48-201ENST00000364953 64 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms