Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.74□□□□□ -2.29
VCX3BQ9H321 7SK.13-201ENST00000622040 250 ntBASIC0.74□□□□□ -2.29
VCX3BQ9H321 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.74□□□□□ -2.29
VCX3BQ9H321 AC006927.3-201ENST00000638789 384 ntBASIC0.74□□□□□ -2.29
VCX3BQ9H321 AL159152.1-201ENST00000635019 2587 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 RNU6-500P-201ENST00000362349 107 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 RNU6-862P-201ENST00000362804 105 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 U3.4-201ENST00000363352 213 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 RNU6-1019P-201ENST00000364424 107 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 SNORD32A-201ENST00000364805 84 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 SNORD31B-201ENST00000364977 69 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 SNORD115-7-201ENST00000365306 82 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 RNU6-116P-201ENST00000384042 109 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 MTCO2P8-201ENST00000412213 658 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 MTCO1P21-201ENST00000416634 589 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 RPS6P15-201ENST00000431996 751 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.73□□□□□ -2.29
VCX3BQ9H321 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.73□□□□□ -2.29
VCX3BQ9H321 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC013470.1-201ENST00000453438 462 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC079140.3-201ENST00000511111 550 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.73□□□□□ -2.29
VCX3BQ9H321 RNU6-1098P-201ENST00000516772 96 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC008088.1-201ENST00000580993 280 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 MIR4513-201ENST00000581077 86 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC009977.1-201ENST00000586015 570 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC112191.3-201ENST00000604371 277 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 MIR3976-201ENST00000606807 139 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 MIR6078-201ENST00000611069 100 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC136475.10-201ENST00000620253 385 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC009878.1-201ENST00000621819 340 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 AC241585.2-209ENST00000638217 143 ntBASIC0.73□□□□□ -2.29
VCX3BQ9H321 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
VCX3BQ9H321 MTND4P14-201ENST00000435799 1354 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VCX3BQ9H321 RNU6-428P-201ENST00000362942 107 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 SNORA20.2-201ENST00000383922 131 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 RNU6-331P-201ENST00000384724 107 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 RNU6-550P-201ENST00000391057 101 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC098592.1-201ENST00000419352 333 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 GTF2IP13-201ENST00000438487 386 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 GAPDHP17-201ENST00000449858 1001 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC007547.1-201ENST00000462177 490 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 RNU1-41P-201ENST00000516161 162 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 RNU1-48P-201ENST00000516400 162 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC109479.2-201ENST00000517842 174 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC021231.3-201ENST00000558497 370 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 MTCO2P2-201ENST00000591258 225 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 VN1R107P-201ENST00000601784 209 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AF131215.7-201ENST00000602443 707 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC078795.3-201ENST00000602913 472 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC107304.1-201ENST00000604229 296 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.72□□□□□ -2.29
VCX3BQ9H321 TUSC7.1-201ENST00000610969 165 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AL157834.3-201ENST00000615543 103 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 AC007671.2-201ENST00000637344 619 ntBASIC0.72□□□□□ -2.29
VCX3BQ9H321 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
VCX3BQ9H321 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.71□□□□□ -2.3
VCX3BQ9H321 AC092268.1-201ENST00000342691 405 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNU1-76P-201ENST00000362903 159 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 U3.9-201ENST00000363823 204 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNU1-96P-201ENST00000364163 162 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNY1P12-201ENST00000364251 105 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNU6-715P-201ENST00000365204 103 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNU5E-5P-201ENST00000365379 116 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 Y_RNA.367-201ENST00000365544 101 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 MIR194-1-201ENST00000384892 85 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 MIR222-201ENST00000384992 110 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 AL117342.1-201ENST00000404861 406 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 SSR1P2-201ENST00000415208 787 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 HIGD1AP15-201ENST00000416198 280 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 AL117339.3-201ENST00000418733 162 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 ARL5AP1-201ENST00000418991 388 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 AL356583.2-201ENST00000426536 280 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RPL23AP95-201ENST00000426806 265 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 SNAP23P1-201ENST00000433229 246 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 AL512286.1-201ENST00000439244 400 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 USP9YP12-201ENST00000450481 570 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNU7-14P-201ENST00000459331 62 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.71□□□□□ -2.3
VCX3BQ9H321 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.71□□□□□ -2.3
VCX3BQ9H321 AC104136.1-201ENST00000512969 394 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 RNU5F-4P-201ENST00000516581 114 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 AP000873.5-201ENST00000533906 236 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 HSPE1P4-201ENST00000550617 308 ntBASIC0.71□□□□□ -2.3
VCX3BQ9H321 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.71□□□□□ -2.3
VCX3BQ9H321 AC004817.2-201ENST00000561794 651 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms