Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU6-245P-201ENST00000384020 107 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 SNORA72.4-201ENST00000384174 132 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-140P-201ENST00000384566 108 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 MIR15B-201ENST00000385045 98 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 SNORA26.3-201ENST00000391119 136 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AL158823.1-201ENST00000418441 478 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AC244098.2-201ENST00000422068 99 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AC244670.1-201ENST00000436879 112 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AC009237.8-201ENST00000445492 379 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-168P-201ENST00000516189 101 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 AL391903.3-201ENST00000612158 163 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 U2.21-201ENST00000637295 81 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 AC073073.2-201ENST00000609827 2578 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-969P-201ENST00000383900 105 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 AL355497.1-201ENST00000406262 551 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 HMGB1P37-201ENST00000439613 609 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 HMGB1P22-201ENST00000505315 124 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 SNORA31.23-201ENST00000517219 133 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 USP8P1-201ENST00000494673 3183 ntBASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
NUCKS1Q9H1E3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 SNORD35B-201ENST00000363660 87 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 Y_RNA.251-201ENST00000364551 99 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-915P-201ENST00000364943 103 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-588P-201ENST00000410281 105 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 MIR5684-201ENST00000585074 65 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 MIR6134-201ENST00000617606 109 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 MIR8059-201ENST00000620427 81 ntBASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUCKS1Q9H1E3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-778P-201ENST00000363269 103 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 SNORA70C-201ENST00000384538 135 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 MIR325-201ENST00000385260 98 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 FTH1P15-201ENST00000406984 280 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 TOMM22P1-201ENST00000418578 312 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 AC092047.1-201ENST00000424997 240 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 AC004975.1-201ENST00000428733 208 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 ARF4P2-201ENST00000430209 526 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 AC025627.2-201ENST00000576220 160 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 MIR3914-2-201ENST00000637339 95 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 AL133383.2-201ENST00000622958 2336 ntBASIC4.37□□□□□ -1.71
NUCKS1Q9H1E3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 RNU1-62P-201ENST00000362599 164 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 SNORA25.7-201ENST00000364375 127 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 Y_RNA.294-201ENST00000364916 102 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 MT-TT-201ENST00000387460 66 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 MIR526A2-201ENST00000390198 65 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 PTMAP5-201ENST00000393073 333 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AC063976.4-201ENST00000421971 163 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 AC125238.1-201ENST00000448842 249 ntBASIC4.36□□□□□ -1.71
NUCKS1Q9H1E3 HMGB3P8-201ENST00000449709 577 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms