Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORA29-201ENST00000384183 140 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 RNU1-139P-201ENST00000391307 165 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 MIR548I2-201ENST00000408348 149 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 RNU6-1245P-201ENST00000411130 106 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 RNU6-1001P-201ENST00000411265 100 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 BPY2DP-201ENST00000422208 265 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 WARS2P1-201ENST00000429678 537 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 BX510359.1-201ENST00000456973 237 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 AC073901.1-201ENST00000462471 408 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 AP002884.2-201ENST00000471647 395 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 SNORD59.2-201ENST00000516873 68 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 AC024153.1-201ENST00000603103 365 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.63□□□□□ -1.83
RNF38Q9H0F5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 IGHVIII-44-202ENST00000636235 289 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 ZNF826P-207ENST00000622273 1910 ntBASIC3.63□□□□□ -1.83
RNF38Q9H0F5 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF38Q9H0F5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
RNF38Q9H0F5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RNF38Q9H0F5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 AC110491.1-201ENST00000562191 2010 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 SNORD56.1-201ENST00000362913 68 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.170-201ENST00000363746 110 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 RNU6-923P-201ENST00000364753 107 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 RNU6-514P-201ENST00000384208 107 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 SNORD116-20-201ENST00000384529 92 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 RNU2-61P-201ENST00000411069 191 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 EIF1AXP1-201ENST00000419267 435 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 RPL23AP83-201ENST00000434984 473 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 TMSB4XP3-201ENST00000445144 114 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 RPL23AP3-201ENST00000453844 468 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 RNU6-346P-201ENST00000516288 111 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 MIR3200-201ENST00000580767 85 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.62□□□□□ -1.83
RNF38Q9H0F5 AL353743.1-202ENST00000431724 1695 ntBASIC3.62□□□□□ -1.83
RNF38Q9H0F5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RNU6-942P-201ENST00000363002 107 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.122-201ENST00000363331 96 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.291-201ENST00000364886 113 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.319-201ENST00000365138 92 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 MIR518D-201ENST00000385014 87 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RNA5SP213-201ENST00000391031 106 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RNA5SP120-201ENST00000410900 112 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RNU5A-5P-201ENST00000411054 116 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC005326.1-201ENST00000429197 123 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC098831.1-201ENST00000440661 216 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC096638.1-201ENST00000444678 216 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 MRPS10P1-201ENST00000448483 130 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC006026.2-201ENST00000457376 180 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RN7SL594P-201ENST00000470590 287 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RPL26P26-201ENST00000480251 434 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC093663.1-201ENST00000497190 394 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 SNORA31.21-201ENST00000517180 77 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC027288.2-201ENST00000553028 243 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 RPL21P9-201ENST00000556149 474 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AL451007.1-201ENST00000595491 289 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 MAPK10-373ENST00000641983 6772 ntBASIC3.61□□□□□ -1.83
RNF38Q9H0F5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF38Q9H0F5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.8-201ENST00000362353 102 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 RNU6-626P-201ENST00000363354 107 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 RNU6-961P-201ENST00000363893 105 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.275-201ENST00000364726 110 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 RNU6-20P-201ENST00000384106 107 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 MIR491-201ENST00000384877 84 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 MIR10B-201ENST00000385011 110 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AC117440.1-201ENST00000474107 571 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AP001025.1-201ENST00000486139 332 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AC091959.1-201ENST00000495857 238 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 Y_RNA.662-201ENST00000516028 97 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 RNU6-567P-201ENST00000516746 107 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 SNORA70.24-201ENST00000517233 118 ntBASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF38Q9H0F5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms