Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 CKS1BP5-201ENST00000434172 273 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RPL26P9-201ENST00000457466 433 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RN7SKP18-201ENST00000516005 275 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RNU6-521P-201ENST00000516663 105 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 AL160236.1-201ENST00000556317 195 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RPL12P50-201ENST00000603116 116 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RNU6-94P-201ENST00000607728 107 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 RMST_8.1-201ENST00000610287 165 ntBASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.25□□□□□ -1.73
COL25A1Q9BXS0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 MIR494-201ENST00000349529 81 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 RNU6-146P-201ENST00000384602 108 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 MIR1251-201ENST00000408552 70 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 SNORA36B-201ENST00000410438 131 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 AC126124.2-201ENST00000413542 321 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP103-201ENST00000459503 118 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 RN7SL585P-201ENST00000470538 280 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 RNU7-115P-201ENST00000516433 55 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 SNORA31.16-201ENST00000516773 139 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 SNORA31.23-201ENST00000517219 133 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 AC233702.9-201ENST00000581528 203 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 SNRPGP20-201ENST00000604477 205 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 AL022345.2-201ENST00000606307 135 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 AC025754.2-201ENST00000606491 432 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 MIR548AY-201ENST00000617669 107 ntBASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL25A1Q9BXS0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RNA5SP50-201ENST00000363731 107 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RNU6-484P-201ENST00000384016 107 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 MIR1263-201ENST00000408324 86 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AL135786.1-201ENST00000415892 214 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RPL27AP8-201ENST00000424277 446 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 RPL23AP46-201ENST00000438548 490 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AC117454.1-201ENST00000491120 168 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 Y_RNA.676-201ENST00000516393 96 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AC107918.3-201ENST00000533272 382 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AC099778.2-201ENST00000610904 211 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 U6.115-201ENST00000636045 103 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 MIR3529-201ENST00000637713 78 ntBASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL25A1Q9BXS0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 CEP170P1-201ENST00000502249 4587 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AP000542.2-201ENST00000623199 6179 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 AC107068.1-201ENST00000563286 4218 ntBASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL25A1Q9BXS0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms