Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC109479.2-201ENST00000517842 174 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AP005660.1-201ENST00000522972 293 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 MIR3913-1-201ENST00000577744 102 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 NIFKP6-201ENST00000598115 845 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AL078605.1-201ENST00000603529 500 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC018889.1-201ENST00000605372 397 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AL022345.1-201ENST00000607292 135 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 MIR7974-201ENST00000615835 79 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC022418.1-201ENST00000624118 445 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 RNU1-58P-201ENST00000362413 163 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 RNU6-42P-201ENST00000384165 107 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 VN1R108P-201ENST00000431580 830 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AC132479.1-201ENST00000449160 144 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 MTCO2P6-201ENST00000463134 685 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 RNU2-69P-201ENST00000516061 100 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AP005639.2-201ENST00000527592 928 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 DUXAP5-201ENST00000529668 529 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AC123912.5-201ENST00000605470 343 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AC072046.2-201ENST00000618366 268 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 AL390237.1-201ENST00000404226 1415 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.67□□□□□ -2.14
RPAP1Q9BWH6 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 RNU6-428P-201ENST00000362942 107 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 SNORD114-22-201ENST00000365423 72 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 Y_RNA.480-201ENST00000384364 102 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 RNU6-692P-201ENST00000384496 107 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 RNU6-1127P-201ENST00000384580 107 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 RNU6-606P-201ENST00000384721 111 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 SNORA16.2-201ENST00000390991 127 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 MTND1P27-201ENST00000451117 902 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 SCARNA18-201ENST00000459004 134 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 GMFBP1-201ENST00000467831 427 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC079382.1-201ENST00000493346 557 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 MTCYBP18-201ENST00000501056 747 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC022447.4-201ENST00000504053 364 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 RNA5SP220-201ENST00000516298 104 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AP002963.1-201ENST00000530590 184 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AL356057.1-201ENST00000533798 831 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC008752.3-201ENST00000588113 712 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC040904.1-201ENST00000590850 223 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC136443.5-201ENST00000603741 370 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC091805.2-201ENST00000603848 235 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 AC099842.1-201ENST00000619919 596 ntBASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
RPAP1Q9BWH6 RNU4-15P-201ENST00000362613 141 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 RNU6-336P-201ENST00000364891 107 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 RNU6-43P-201ENST00000384302 107 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 MIR597-201ENST00000384968 97 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 RNU2-9P-201ENST00000410194 145 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AL357134.1-201ENST00000445848 426 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC013470.1-201ENST00000453438 462 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 C1DP4-201ENST00000455429 424 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 SNRPGP7-201ENST00000469016 106 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC004223.1-201ENST00000479840 271 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC105417.1-201ENST00000514691 285 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 TRAV32-201ENST00000553993 340 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 BNIP3P16-201ENST00000589779 534 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 BNIP3P25-201ENST00000596023 559 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC025449.1-201ENST00000603896 529 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 U1.36-201ENST00000620684 176 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 AC120349.3-201ENST00000624377 529 ntBASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.65□□□□□ -2.15
RPAP1Q9BWH6 Y_RNA.99-201ENST00000363138 105 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 RNU6-1141P-201ENST00000364520 107 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 RNU2-29P-201ENST00000410423 189 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 MTCO2P34-201ENST00000421994 607 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 UBE2V1P4-201ENST00000425374 344 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 AC010975.2-201ENST00000427781 588 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 MTCO2P11-201ENST00000431069 680 ntBASIC1.64□□□□□ -2.15
RPAP1Q9BWH6 RPS27AP8-201ENST00000452665 445 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms