Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LRFN3Q9BTN0 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
LRFN3Q9BTN0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 AC080128.1-201ENST00000474389 1917 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 RNU6-227P-201ENST00000362865 103 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 SNORD56.1-201ENST00000362913 68 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 RNU4-50P-201ENST00000364361 141 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 SNORA71.1-201ENST00000364523 117 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 Y_RNA.518-201ENST00000384552 113 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 BMS1P22-201ENST00000414726 313 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 RNU6-570P-201ENST00000517051 105 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 DEFB122-202ENST00000569013 197 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 AL159153.1-201ENST00000619688 317 ntBASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRFN3Q9BTN0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 U8.2-201ENST00000363156 134 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 Y_RNA.117-201ENST00000363294 101 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 Y_RNA.164-201ENST00000363709 102 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AL079342.1-201ENST00000401460 267 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AP000275.1-201ENST00000411943 390 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC139712.2-201ENST00000424302 339 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 RPS29P26-201ENST00000477483 171 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC108210.2-201ENST00000503681 201 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC109329.1-201ENST00000518744 317 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC144568.1-201ENST00000520139 137 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC105137.2-201ENST00000569073 466 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC004584.2-201ENST00000570407 410 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 UBL5P2-201ENST00000583788 219 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC098479.1-201ENST00000609225 154 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 MIR486-1-201ENST00000612171 68 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 UCA1.1-201ENST00000620952 75 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AC130454.1-201ENST00000622948 401 ntBASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LRFN3Q9BTN0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 U8.8-201ENST00000365399 135 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 Y_RNA.478-201ENST00000384358 107 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 MIR521-1-201ENST00000384902 87 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AL591034.2-201ENST00000402839 359 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC063976.3-201ENST00000426849 329 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 ARF4P2-201ENST00000430209 526 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 MTND5P15-201ENST00000434246 349 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 LINC01399-202ENST00000458450 244 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 RPL31P61-201ENST00000496160 376 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 HMGB1P35-201ENST00000503360 598 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AP003733.2-201ENST00000529409 171 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AP002770.2-201ENST00000543613 532 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AC012433.1-201ENST00000588916 398 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 RPL23AP78-201ENST00000599928 470 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AL390123.1-201ENST00000603216 237 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 SDR42E1P4-201ENST00000620894 481 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 AP003122.5-201ENST00000527668 3766 ntBASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.29□□□□□ -1.88
LRFN3Q9BTN0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 Y_RNA.226-201ENST00000364337 114 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RNU6-200P-201ENST00000364743 107 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 SAR1AP2-201ENST00000392696 594 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 MTCO3P19-201ENST00000415864 321 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 AL590135.1-201ENST00000422215 156 ntBASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN3Q9BTN0 RN7SL330P-201ENST00000469709 307 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms