Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RNU6-928P-201ENST00000516876 104 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 ACA59.2-201ENST00000517061 156 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RN7SKP289-201ENST00000517244 295 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MTND5P41-201ENST00000517498 206 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AC018448.1-201ENST00000552843 316 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR4308-201ENST00000580634 81 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AL356575.1-201ENST00000603008 283 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 U3.45-201ENST00000607547 219 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AC108706.1-201ENST00000611053 297 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 AC104465.1-201ENST00000611365 139 ntBASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.14□□□□□ -1.75
ZKSCAN3Q9BRR0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 Y_RNA.8-201ENST00000362353 102 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 RNA5SP119-201ENST00000362715 117 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-245P-201ENST00000384020 107 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 YPEL5P1-201ENST00000419731 367 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC099548.1-201ENST00000421443 426 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 OOSP1P1-201ENST00000423265 274 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC019205.3-201ENST00000424573 156 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC009237.7-201ENST00000447357 229 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC110768.1-201ENST00000509222 400 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-1219P-201ENST00000516143 112 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-579P-201ENST00000516879 102 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC006199.1-201ENST00000548728 219 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC055872.1-201ENST00000570978 278 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR5692C2-201ENST00000577959 77 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC020914.4-201ENST00000597690 277 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC099654.7-201ENST00000635788 2127 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 AC002543.1-201ENST00000299783 1954 ntBASIC4.13□□□□□ -1.75
ZKSCAN3Q9BRR0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 FAM35DP-201ENST00000323387 2712 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 RBBP8P1-201ENST00000449447 1844 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AC092593.1-201ENST00000515413 1815 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-793P-201ENST00000384233 104 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 Y_RNA.498-201ENST00000384460 102 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 SNORD17-201ENST00000390930 237 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AC024067.1-201ENST00000426199 223 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AL110115.1-201ENST00000614396 364 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AL391261.4-201ENST00000616012 481 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AP003355.3-201ENST00000623465 114 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AC073308.1-201ENST00000623696 305 ntBASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ZKSCAN3Q9BRR0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU4-80P-201ENST00000363200 141 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 Y_RNA.441-201ENST00000384123 112 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-1310P-201ENST00000384153 107 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-1081P-201ENST00000384537 107 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 SNORA40.19-201ENST00000390846 128 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 PTMAP5-201ENST00000393073 333 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 AL512633.1-201ENST00000399931 655 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR320B2-201ENST00000408479 138 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 RAB28P5-201ENST00000427490 651 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 AL121594.1-201ENST00000475906 575 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 RNU6-191P-201ENST00000516295 94 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 SNORA31.16-201ENST00000516773 139 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 HIGD1AP1-201ENST00000550979 275 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 MIR6075-201ENST00000620782 95 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 AL365265.1-201ENST00000621045 234 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 AC106871.1-201ENST00000568324 3102 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 CUL1P1-201ENST00000509510 2425 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 AL161912.2-201ENST00000565707 3007 ntBASIC4.11□□□□□ -1.75
ZKSCAN3Q9BRR0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 AL672296.1-201ENST00000427780 2158 ntBASIC4.1□□□□□ -1.75
ZKSCAN3Q9BRR0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms