Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 AP000873.5-201ENST00000533906 236 ntBASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 AK6P1-201ENST00000540219 478 ntBASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 AL118558.2-201ENST00000556294 238 ntBASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 MIR4435-1-201ENST00000582552 80 ntBASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 HULC.1-201ENST00000612720 240 ntBASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.19□□□□□ -2.22
SEC22CQ9BRL7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 Y_RNA.332-201ENST00000365271 113 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 RNU6-142P-201ENST00000384019 107 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 RNU5A-6P-201ENST00000384136 116 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 MIR517C-201ENST00000385103 95 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 SNORD73A-201ENST00000386062 65 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC073464.1-201ENST00000429823 534 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AL133396.1-201ENST00000432048 687 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AL606489.2-201ENST00000433886 234 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AL049873.1-201ENST00000480540 376 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AK3P2-201ENST00000507976 429 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 RPL39P5-202ENST00000512505 151 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 RNVU1-2-201ENST00000516326 135 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 SNORA40.12-201ENST00000516329 111 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC087441.2-201ENST00000529141 262 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 HSPE1P4-201ENST00000550617 308 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC006362.1-201ENST00000567392 174 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 MIR3136-201ENST00000583498 78 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 BNIP3P22-201ENST00000593399 556 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AP001836.1-201ENST00000604675 523 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AL590240.4-201ENST00000616908 390 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 AC090582.1-201ENST00000636321 199 ntBASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
SEC22CQ9BRL7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 U8.1-201ENST00000362843 134 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 RNA5SP493-201ENST00000364115 91 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 SNORA48.1-201ENST00000390879 135 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 SNORA12.2-201ENST00000391040 156 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 RNU6-1245P-201ENST00000411130 106 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC009310.1-201ENST00000414414 451 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 UBE2V1P4-201ENST00000425374 344 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 MTATP6P17-201ENST00000431030 672 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC002486.1-201ENST00000435098 391 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 HMGN2P18-201ENST00000450680 270 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 MTCO2P18-201ENST00000457151 658 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC007547.1-201ENST00000462177 490 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AL163973.1-201ENST00000484753 577 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC104564.1-201ENST00000493028 407 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 HMGB1P29-201ENST00000505659 499 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC073648.5-201ENST00000603502 305 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 RNU6-85P-201ENST00000605989 107 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AC025754.2-201ENST00000606491 432 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 U2.17-201ENST00000611454 95 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 uc_338.34-201ENST00000617467 174 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 AL354950.2-201ENST00000617939 290 ntBASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SEC22CQ9BRL7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 Y_RNA.1-201ENST00000352915 104 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RNU4-20P-201ENST00000365601 151 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RNU6-378P-201ENST00000384324 107 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 MIR583-201ENST00000384846 75 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 Y_RNA.582-201ENST00000391023 95 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RNA5SP100-201ENST00000410903 110 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RNA5SP59-201ENST00000410922 110 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RN7SKP192-201ENST00000411291 327 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RNA5SP508-201ENST00000411327 119 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 AL663109.1-201ENST00000411498 844 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 AC078809.1-201ENST00000427601 140 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 AC245102.2-201ENST00000448956 180 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 RPS3AP17-201ENST00000472594 777 ntBASIC1.16□□□□□ -2.22
SEC22CQ9BRL7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms