Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-221P-201ENST00000459541 99 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 AC007012.1-201ENST00000567192 175 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 MIR3667-201ENST00000581025 74 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 MIR4480-201ENST00000582492 71 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 AL391358.1-201ENST00000605342 190 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 AC005086.4-201ENST00000623065 213 ntBASIC4.35□□□□□ -1.71
USB1Q9BQ65 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.35□□□□□ -1.71
USB1Q9BQ65 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USB1Q9BQ65 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
USB1Q9BQ65 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
USB1Q9BQ65 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USB1Q9BQ65 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
USB1Q9BQ65 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
USB1Q9BQ65 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.35□□□□□ -1.71
USB1Q9BQ65 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
USB1Q9BQ65 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USB1Q9BQ65 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
USB1Q9BQ65 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USB1Q9BQ65 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USB1Q9BQ65 Y_RNA.85-201ENST00000363014 111 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 RNU6-1131P-201ENST00000364955 107 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 RNU6-750P-201ENST00000390946 107 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 AF228730.3-201ENST00000436691 102 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 RNU7-14P-201ENST00000459331 62 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 RN7SL517P-201ENST00000462240 305 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 AC008155.2-201ENST00000464337 397 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 RPL36AP48-201ENST00000485521 314 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 AC073073.1-201ENST00000493920 463 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 AC107934.2-201ENST00000518653 310 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 FAM25E-202ENST00000608562 189 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
USB1Q9BQ65 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.34□□□□□ -1.71
USB1Q9BQ65 AL136360.1-201ENST00000503377 1900 ntBASIC4.34□□□□□ -1.71
USB1Q9BQ65 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
USB1Q9BQ65 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
USB1Q9BQ65 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.34□□□□□ -1.72
USB1Q9BQ65 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
USB1Q9BQ65 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USB1Q9BQ65 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
USB1Q9BQ65 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 Y_RNA.111-201ENST00000363248 100 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 Y_RNA.328-201ENST00000365208 113 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
USB1Q9BQ65 Y_RNA.558-201ENST00000384685 113 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 SNORD12C-201ENST00000386307 89 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 RNU6-57P-201ENST00000411348 103 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 NDUFB1P1-201ENST00000435191 180 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 RNU7-23P-201ENST00000459465 62 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 RPL27AP5-201ENST00000469428 449 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 AP002884.2-201ENST00000471647 395 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 RNU1-61P-201ENST00000516107 151 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 GNRHR2P1-201ENST00000555315 631 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 AC106785.1-201ENST00000565935 262 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 AC091042.1-201ENST00000579213 173 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 Pinc.1-201ENST00000616452 154 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 BX005214.3-202ENST00000619809 325 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 AC009831.4-201ENST00000620744 325 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USB1Q9BQ65 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
USB1Q9BQ65 ZFRP1-201ENST00000457579 2970 ntBASIC4.33□□□□□ -1.72
USB1Q9BQ65 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.33□□□□□ -1.72
USB1Q9BQ65 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USB1Q9BQ65 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 AC006504.1-201ENST00000562493 3666 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
USB1Q9BQ65 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 Y_RNA.163-201ENST00000363702 113 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 SNORA51.5-201ENST00000384126 131 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 MIR298-201ENST00000401212 88 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 MIR1302-5-201ENST00000408164 150 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 RNA5SP113-201ENST00000410486 84 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 AL450023.3-201ENST00000440592 271 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 SNORD11-201ENST00000459124 84 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 RNU6-126P-201ENST00000516685 103 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 AC079598.5-201ENST00000547460 117 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 AL365205.2-201ENST00000594586 68 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 MIR6076-201ENST00000617521 113 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 AC087385.3-201ENST00000620477 187 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USB1Q9BQ65 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
USB1Q9BQ65 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
USB1Q9BQ65 AC125257.1-201ENST00000560400 2930 ntBASIC4.32□□□□□ -1.72
USB1Q9BQ65 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
USB1Q9BQ65 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USB1Q9BQ65 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
USB1Q9BQ65 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms