Protein–RNA interactions for Protein: Q99966

CITED1, Cbp/p300-interacting transactivator 1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1Q99966 SNORA26.9-201ENST00000391322 122 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 MIR1262-201ENST00000408276 93 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 AL030996.1-201ENST00000411430 235 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 RPL31P63-201ENST00000422565 375 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 UBE2V1P4-201ENST00000425374 344 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 AC078809.1-201ENST00000427601 140 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 SNAP23P1-201ENST00000433229 246 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.72□□□□□ -2.13
CITED1Q99966 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.72□□□□□ -2.13
CITED1Q99966 RNA5SP200-201ENST00000516360 103 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 CENPUP1-201ENST00000526649 1202 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 AL512360.1-201ENST00000555346 234 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.72□□□□□ -2.13
CITED1Q99966 RMST_6.1-201ENST00000611980 203 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 U1.36-201ENST00000620684 176 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 AC068792.1-201ENST00000621354 417 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
CITED1Q99966 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
CITED1Q99966 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CITED1Q99966 RNU6-82P-201ENST00000363970 107 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 Y_RNA.238-201ENST00000364441 102 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 RNU6-38P-201ENST00000384085 107 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 SNORA67.3-201ENST00000384366 140 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 Y_RNA.504-201ENST00000384481 104 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 SNORD73A-201ENST00000386062 65 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 U8.13-201ENST00000390842 128 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.71□□□□□ -2.14
CITED1Q99966 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.71□□□□□ -2.14
CITED1Q99966 AC007677.1-201ENST00000445757 515 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 RNU6-333P-201ENST00000459117 107 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 AC016632.1-201ENST00000503994 196 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 PTP4A1P4-201ENST00000512479 322 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 SCARNA16.3-201ENST00000516595 184 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.71□□□□□ -2.14
CITED1Q99966 AC087854.1-201ENST00000519706 414 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.71□□□□□ -2.14
CITED1Q99966 ANP32BP3-201ENST00000559213 706 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.71□□□□□ -2.14
CITED1Q99966 AP000654.2-201ENST00000605633 586 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 AL357078.3-201ENST00000607528 618 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.71□□□□□ -2.14
CITED1Q99966 MIR1248-201ENST00000629190 106 ntBASIC1.71□□□□□ -2.14
CITED1Q99966 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CITED1Q99966 AC092268.1-201ENST00000342691 405 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 Y_RNA.194-201ENST00000363985 102 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 SNORD32A-201ENST00000364805 84 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 Y_RNA.378-201ENST00000365652 113 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 SNORA12-201ENST00000391162 147 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 RN7SKP61-201ENST00000410642 295 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.7□□□□□ -2.14
CITED1Q99966 TIMM9P3-201ENST00000428659 274 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 MTCO2P3-201ENST00000442543 421 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 MTND3P16-201ENST00000452205 344 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.7□□□□□ -2.14
CITED1Q99966 RNU6-1037P-201ENST00000459571 107 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC027575.1-201ENST00000481064 460 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC091885.1-201ENST00000506658 268 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 SNORA31.16-201ENST00000516773 139 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 RNU6-323P-201ENST00000521915 107 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 GNAI2P1-201ENST00000541815 315 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC109446.1-201ENST00000566172 220 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 MIR3923-201ENST00000579521 83 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.7□□□□□ -2.14
CITED1Q99966 AC009314.1-201ENST00000603871 304 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AP001836.1-201ENST00000604675 523 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC016727.1-205ENST00000605437 569 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC004492.1-201ENST00000607036 742 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC103810.8-201ENST00000607347 118 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AC103705.1-201ENST00000619013 241 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 AL359880.1-201ENST00000621879 266 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CITED1Q99966 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
CITED1Q99966 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CITED1Q99966 CALM2P3-201ENST00000400429 449 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AL023284.1-201ENST00000403956 276 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.69□□□□□ -2.14
CITED1Q99966 ARL5AP1-201ENST00000418991 388 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 BX510359.4-201ENST00000423750 193 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AL133396.1-201ENST00000432048 687 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.69□□□□□ -2.14
CITED1Q99966 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.69□□□□□ -2.14
CITED1Q99966 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.69□□□□□ -2.14
CITED1Q99966 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.69□□□□□ -2.14
CITED1Q99966 RPL38P4-201ENST00000502376 214 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AC093259.1-201ENST00000509755 300 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.69□□□□□ -2.14
CITED1Q99966 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.69□□□□□ -2.14
CITED1Q99966 CBX3P4-201ENST00000538909 354 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.69□□□□□ -2.14
CITED1Q99966 AC078814.3-201ENST00000553036 491 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 AC245505.1-201ENST00000556398 224 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 MIR3198-2-201ENST00000577868 80 ntBASIC1.69□□□□□ -2.14
CITED1Q99966 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms