Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AL031176.1-201ENST00000604554 466 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC004908.3-201ENST00000610248 625 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AP000676.3-201ENST00000623299 569 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC007490.1-201ENST00000624321 703 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU6-611P-201ENST00000384276 104 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RAB28P5-201ENST00000427490 651 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC007215.1-201ENST00000464893 276 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC025423.2-201ENST00000537570 439 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AP002906.1-201ENST00000603405 233 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AL590396.4-201ENST00000636779 956 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU6-1331P-201ENST00000363658 106 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 RNU6-226P-201ENST00000363778 107 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 RNU6-821P-201ENST00000390995 107 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 AC104057.1-201ENST00000515547 497 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 MIR4263-201ENST00000584745 83 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 AC005176.2-201ENST00000596933 147 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.37□□□□□ -2.47
COL12A1Q99715 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 MED13P1-201ENST00000428342 171 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 RNA5SP269-201ENST00000459032 137 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 AC104689.1-201ENST00000473356 768 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 MTCO3P7-201ENST00000510008 774 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 RNA5SP470-201ENST00000516463 106 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 AP005229.2-201ENST00000609980 697 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 AC117490.2-201ENST00000610042 594 ntBASIC-0.37□□□□□ -2.47
COL12A1Q99715 MTND4P4-201ENST00000439033 1366 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
COL12A1Q99715 MTCO2P31-201ENST00000402702 684 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.38□□□□□ -2.47
COL12A1Q99715 AL035398.1-201ENST00000430869 322 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AL133396.1-201ENST00000432048 687 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC106038.2-201ENST00000520706 568 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.38□□□□□ -2.47
COL12A1Q99715 AP000403.1-201ENST00000603349 851 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 RNU6-540P-201ENST00000384622 101 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 MIR593-201ENST00000384856 100 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC093422.3-201ENST00000428506 305 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.38□□□□□ -2.47
COL12A1Q99715 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.38□□□□□ -2.47
COL12A1Q99715 MEMO1P3-201ENST00000459811 302 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.38□□□□□ -2.47
COL12A1Q99715 RPS26P48-201ENST00000491713 339 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC004775.1-201ENST00000607389 753 ntBASIC-0.38□□□□□ -2.47
COL12A1Q99715 AC092268.1-201ENST00000342691 405 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 TAF9BP2-201ENST00000400856 499 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 FCF1P4-201ENST00000448326 183 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 SMURF2P1-201ENST00000514992 481 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC117525.1-201ENST00000515228 503 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 SNORA25.12-201ENST00000516202 82 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 NACAP3-201ENST00000552100 481 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU6-796P-201ENST00000391086 107 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AL139098.1-201ENST00000407291 389 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 MIR1290-201ENST00000408735 78 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 MTCO3P9-201ENST00000506989 781 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC022861.1-201ENST00000522981 663 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AL049870.4-201ENST00000555741 486 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC005951.2-201ENST00000576282 495 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC107304.1-201ENST00000604229 296 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 MIR335-201ENST00000362173 94 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU6-969P-201ENST00000383900 105 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU6-269P-201ENST00000391077 97 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.39□□□□□ -2.47
COL12A1Q99715 AL590002.1-201ENST00000406554 418 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC005094.1-201ENST00000440420 368 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU7-165P-201ENST00000458864 60 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 U7.7-201ENST00000459276 60 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC026616.1-201ENST00000523157 525 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL12A1Q99715 AC091057.3-201ENST00000602684 733 ntBASIC-0.39□□□□□ -2.47
COL12A1Q99715 RNU6-486P-201ENST00000363116 107 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 RNU4-46P-201ENST00000410818 138 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 PTGES3P1-201ENST00000439531 483 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 RPL30P15-201ENST00000457129 321 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 SNORA31.2-201ENST00000516019 134 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 RNA5SP437-201ENST00000517249 129 ntBASIC-0.4□□□□□ -2.47
COL12A1Q99715 AC090572.1-201ENST00000519251 160 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms