Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MIR3923-201ENST00000579521 83 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AP003465.2-201ENST00000602571 373 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 PCGEM1.1-201ENST00000613431 131 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AC083806.3-201ENST00000614016 455 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 MIR7844-201ENST00000616161 122 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AC011155.2-201ENST00000623202 216 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 MTND5P17-201ENST00000418405 1603 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
VAT1Q99536 RNU6-862P-201ENST00000362804 105 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 RNU5F-7P-201ENST00000363696 115 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 SNORD32A-201ENST00000364805 84 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 Y_RNA.327-201ENST00000365201 102 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 RNU6-715P-201ENST00000365204 103 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 RNU6-925P-201ENST00000384629 104 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
VAT1Q99536 RNU2-7P-201ENST00000410794 178 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AL161935.2-201ENST00000414627 60 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AC078809.1-201ENST00000427601 140 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.05□□□□□ -2.24
VAT1Q99536 AC013470.1-201ENST00000453438 462 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 HMGN2P9-201ENST00000476875 229 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.05□□□□□ -2.24
VAT1Q99536 MTND3P3-201ENST00000505004 126 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 RNU6-237P-201ENST00000515985 71 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 RNU6-1178P-201ENST00000516674 107 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 RNU6-1098P-201ENST00000516772 96 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AC109479.2-201ENST00000517842 174 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AP003461.1-201ENST00000528866 78 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 HSPE1P4-201ENST00000550617 308 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AC069114.2-201ENST00000604699 304 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AP000240.1-201ENST00000609910 452 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AL133173.2-201ENST00000614270 90 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AC136475.10-201ENST00000620253 385 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 AL159152.1-201ENST00000635019 2587 ntBASIC1.05□□□□□ -2.24
VAT1Q99536 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.05□□□□□ -2.24
VAT1Q99536 RNU6-1287P-201ENST00000362914 107 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 U3.9-201ENST00000363823 204 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 Y_RNA.255-201ENST00000364581 97 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 RNU4-56P-201ENST00000364700 142 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 RNU6-1060P-201ENST00000384664 107 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 FGF7P8-201ENST00000402994 292 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 RN7SKP61-201ENST00000410642 295 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 HIGD1AP15-201ENST00000416198 280 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 Z82205.1-201ENST00000428456 297 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 ATP5J2P3-201ENST00000451550 258 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 ZNF114P1-201ENST00000453500 292 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 RNU7-14P-201ENST00000459331 62 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.04□□□□□ -2.24
VAT1Q99536 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.04□□□□□ -2.24
VAT1Q99536 AC079140.3-201ENST00000511111 550 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 SNORD60.2-201ENST00000516883 86 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AC015688.6-201ENST00000577737 104 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 MIR3937-201ENST00000580135 106 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AC078795.3-201ENST00000602913 472 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AC107304.1-201ENST00000604229 296 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
VAT1Q99536 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AL359757.2-201ENST00000624309 274 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.04□□□□□ -2.24
VAT1Q99536 U6.114-201ENST00000636407 96 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 MTND4P14-201ENST00000435799 1354 ntBASIC1.04□□□□□ -2.24
VAT1Q99536 SNORD33-201ENST00000362761 85 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 SNORD31B-201ENST00000364977 69 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 Y_RNA.367-201ENST00000365544 101 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 RNU6-378P-201ENST00000384324 107 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 MRPL35P1-201ENST00000404272 572 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 MTCYBP1-201ENST00000454315 1119 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 AC016925.1-201ENST00000458303 298 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 RPL31P3-201ENST00000458430 332 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 AC007547.1-201ENST00000462177 490 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 AC010531.2-201ENST00000465012 153 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.03□□□□□ -2.24
VAT1Q99536 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.03□□□□□ -2.24
VAT1Q99536 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.03□□□□□ -2.24
VAT1Q99536 AC021231.3-201ENST00000558497 370 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 SNORA59B-202ENST00000578183 701 ntBASIC1.03□□□□□ -2.24
VAT1Q99536 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
VAT1Q99536 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
VAT1Q99536 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
VAT1Q99536 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 SNORA63D-201ENST00000364359 132 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 RNU6-1019P-201ENST00000364424 107 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 RNU6-392P-201ENST00000364926 101 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 SNORA26.3-201ENST00000391119 136 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 RPS29P13-201ENST00000402041 169 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 AC073614.1-201ENST00000438690 650 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 UBE2D3P4-201ENST00000441973 436 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 MTND1P18-201ENST00000448191 573 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 AL162395.1-201ENST00000457882 422 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 AL133373.1-201ENST00000497098 94 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.02□□□□□ -2.25
VAT1Q99536 MTCO3P7-201ENST00000510008 774 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.02□□□□□ -2.25
VAT1Q99536 RNU5F-4P-201ENST00000516581 114 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms